Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945547.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 88682172 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 25745 | 0.0 | 7.118776 | 94-95 |
CGTATGC | 29605 | 0.0 | 6.3801136 | 94-95 |
TGCCGTC | 17865 | 0.0 | 6.131333 | 94-95 |
TGGTCGC | 31475 | 0.0 | 6.0519853 | 94-95 |
GTATGCC | 27790 | 0.0 | 6.018107 | 94-95 |
CGCCGTA | 22340 | 0.0 | 5.9258533 | 92-93 |
TATGCCG | 21745 | 0.0 | 5.8973365 | 94-95 |
CTCGGTG | 53300 | 0.0 | 5.373307 | 94-95 |
GCCGTCT | 18795 | 0.0 | 5.358868 | 94-95 |
GTCGCCG | 32685 | 0.0 | 5.27212 | 94-95 |
TCGTATG | 39940 | 0.0 | 5.2040997 | 94-95 |
GCCGTAT | 27985 | 0.0 | 5.183804 | 94-95 |
CGGCTAC | 65170 | 0.0 | 5.1612167 | 94-95 |
TCGGTGG | 51485 | 0.0 | 5.04901 | 94-95 |
ACGGCTA | 66445 | 0.0 | 5.0413795 | 92-93 |