Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945733.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 42129602 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 22695 | 0.0 | 16.76751 | 5 |
CATACAC | 112560 | 0.0 | 14.973452 | 3 |
CTATACT | 23460 | 0.0 | 14.475615 | 4 |
TAGACCG | 9690 | 0.0 | 13.999054 | 5 |
TATACCG | 12860 | 0.0 | 13.71624 | 5 |
GTGTATG | 99755 | 0.0 | 13.715099 | 1 |
TCTATAC | 26685 | 0.0 | 13.702518 | 3 |
ACACATG | 116760 | 0.0 | 13.619346 | 6 |
ACATGAC | 98645 | 0.0 | 13.5914 | 8 |
GACCGTG | 6860 | 0.0 | 13.570454 | 7 |
TATACAG | 22815 | 0.0 | 13.343454 | 5 |
TCATACA | 125180 | 0.0 | 13.324186 | 2 |
ATCATAC | 122050 | 0.0 | 13.173527 | 1 |
CATGACA | 100130 | 0.0 | 13.138033 | 9 |
CACATGA | 114590 | 0.0 | 13.002361 | 7 |
GATTGAG | 95805 | 0.0 | 12.529269 | 7 |
TAGTACT | 26570 | 0.0 | 12.510751 | 4 |
CTAGTAC | 13945 | 0.0 | 12.466245 | 3 |
TACCGTG | 8730 | 0.0 | 12.304165 | 7 |
ATAATAC | 39000 | 0.0 | 12.266713 | 3 |