Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945766.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 53358652 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 8255 | 0.0 | 7.862651 | 48-49 |
TATGCCG | 10475 | 0.0 | 6.3790317 | 46-47 |
GCCGTCT | 9305 | 0.0 | 6.3319216 | 48-49 |
ATGCCGT | 9390 | 0.0 | 6.325439 | 46-47 |
TCGGAAG | 22775 | 0.0 | 6.2833877 | 3 |
GAGCACA | 22110 | 0.0 | 6.0786357 | 9 |
AGAGCAC | 24030 | 0.0 | 5.8076754 | 8 |
GCACACG | 11560 | 0.0 | 5.670541 | 10-11 |
CGTATGC | 11950 | 0.0 | 5.65092 | 44-45 |
GTATGCC | 11165 | 0.0 | 5.5763826 | 44-45 |