Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945512.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30197542 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 15075 | 0.0 | 13.810739 | 5 |
CTATACT | 15845 | 0.0 | 12.783669 | 4 |
CTAGGCT | 6910 | 0.0 | 11.902289 | 4 |
TATACCG | 10525 | 0.0 | 11.743678 | 5 |
TCTATAC | 19500 | 0.0 | 11.424671 | 3 |
GTATTAG | 20980 | 0.0 | 11.140984 | 1 |
GTATATA | 42100 | 0.0 | 11.025739 | 1 |
ACAGTGC | 6020 | 0.0 | 10.929671 | 8 |
GTATAGG | 11340 | 0.0 | 10.865779 | 1 |
CATACAC | 62855 | 0.0 | 10.520933 | 3 |
ATACCGT | 11135 | 0.0 | 10.509459 | 6 |
GTATAGA | 19985 | 0.0 | 10.471972 | 1 |
TAGGCCG | 4055 | 0.0 | 10.430908 | 5 |
TAGACTG | 6980 | 0.0 | 10.301643 | 5 |
TATACAG | 17615 | 0.0 | 10.271849 | 5 |
GTATTAT | 29880 | 0.0 | 10.183482 | 1 |
ACATGAC | 46825 | 0.0 | 10.077004 | 8 |
TAATACT | 29005 | 0.0 | 10.013504 | 4 |
GTGTATG | 60700 | 0.0 | 9.95605 | 1 |
GTACTAG | 11150 | 0.0 | 9.912099 | 1 |