Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945562.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 105082766 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCGTCT | 29915 | 0.0 | 7.8729353 | 94-95 |
TGCCGTC | 29590 | 0.0 | 7.528393 | 94-95 |
GGTCGCC | 37400 | 0.0 | 7.4794593 | 94-95 |
TATGCCG | 36925 | 0.0 | 7.4068146 | 94-95 |
GTATGCC | 43640 | 0.0 | 7.319204 | 94-95 |
CGTATGC | 47685 | 0.0 | 7.173815 | 94-95 |
ATGCCGT | 32960 | 0.0 | 6.7808714 | 92-93 |
CGCCGTA | 30915 | 0.0 | 6.269607 | 92-93 |
TGGTCGC | 44000 | 0.0 | 6.125085 | 92-93 |
GTCGCCG | 43995 | 0.0 | 5.862229 | 94-95 |
TCGTATG | 63160 | 0.0 | 5.6135793 | 94-95 |
CTCGTAT | 68400 | 0.0 | 5.4321437 | 94-95 |
CCGTATC | 38185 | 0.0 | 5.39593 | 94-95 |
CTCGGTG | 71945 | 0.0 | 5.373267 | 94-95 |
GCCGTAT | 37910 | 0.0 | 5.1055837 | 92-93 |