Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945681.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 61999164 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCCGTA | 5265 | 0.0 | 7.1796045 | 56 |
GGTCGCC | 6965 | 0.0 | 6.280199 | 53 |
CGTGTAG | 8615 | 0.0 | 6.194182 | 25 |
GCGTCGT | 8890 | 0.0 | 6.158931 | 21 |
GAGCGTC | 8865 | 0.0 | 6.0564647 | 19 |
AGCGTCG | 8840 | 0.0 | 6.0343823 | 20 |
GCCGTAT | 7225 | 0.0 | 5.3290706 | 57 |
GAGCGGT | 10945 | 0.0 | 5.001673 | 19 |