Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945534.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 83939888 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 17965 | 0.0 | 7.5952315 | 94-95 |
CGTATGC | 23695 | 0.0 | 6.474151 | 94-95 |
TATGCCG | 17895 | 0.0 | 6.14437 | 94-95 |
GTATGCC | 22395 | 0.0 | 5.9981575 | 94-95 |
TGGTCGC | 23985 | 0.0 | 5.82146 | 94-95 |
TGCCGTC | 14815 | 0.0 | 5.7943444 | 94-95 |
CTCGGTG | 40155 | 0.0 | 5.4764543 | 94-95 |
CGCCGTA | 16330 | 0.0 | 5.4352508 | 94-95 |
GTCGCCG | 25145 | 0.0 | 5.3948493 | 94-95 |
ATGCCGT | 16995 | 0.0 | 5.2849336 | 94-95 |
CACTAGC | 66415 | 0.0 | 5.066389 | 94-95 |
GCCGTCT | 15505 | 0.0 | 5.0580244 | 94-95 |
TCGTATG | 35390 | 0.0 | 5.0010004 | 94-95 |