Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945551.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 112300742 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 28670 | 0.0 | 8.034633 | 94-95 |
TGCCGTC | 23080 | 0.0 | 7.2597485 | 94-95 |
GCCGTCT | 23925 | 0.0 | 7.0033436 | 94-95 |
CGTATGC | 38740 | 0.0 | 6.774803 | 94-95 |
TATGCCG | 28675 | 0.0 | 6.756557 | 94-95 |
GTATGCC | 35580 | 0.0 | 6.7512393 | 94-95 |
TGGTCGC | 34880 | 0.0 | 6.5476403 | 94-95 |
ATGCCGT | 26420 | 0.0 | 6.201715 | 92-93 |
GTCGCCG | 35415 | 0.0 | 5.963681 | 94-95 |
CGCCGTA | 24750 | 0.0 | 5.7994914 | 92-93 |
CTCGGTG | 60175 | 0.0 | 5.5127664 | 94-95 |
TCGTATG | 52125 | 0.0 | 5.3052497 | 94-95 |
TCGGTGG | 58095 | 0.0 | 5.079991 | 94-95 |
CACTAGC | 108530 | 0.0 | 5.010406 | 94-95 |