FastQCFastQC Report
Wed 16 Nov 2016
SRR1945497.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1945497.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65787624
Sequences flagged as poor quality0
Sequence length40-101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCC72200.06.13472244-45
AGAGCGT189750.05.37800039
TCGGAAG345150.05.1974534
CGCCGTA93350.05.177586646-47
TGGTCGC97050.05.040096842-43