Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945677.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 61135848 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 8850 | 0.0 | 7.44045 | 53 |
CGCCGTA | 7760 | 0.0 | 7.268342 | 56 |
GCCGTAT | 8500 | 0.0 | 7.1304154 | 57 |
TGGTCGC | 10710 | 0.0 | 6.0499716 | 52 |
CCGTATC | 10220 | 0.0 | 5.930487 | 58 |
AATGCCG | 13025 | 0.0 | 5.9136477 | 34 |
CGAGACC | 14465 | 0.0 | 5.204249 | 39 |
GAGACCG | 13740 | 0.0 | 5.173024 | 40 |
CTCGGTG | 14930 | 0.0 | 5.1585674 | 47 |
CGTGTAG | 13800 | 0.0 | 5.1456237 | 25 |
GACCGAT | 13775 | 0.0 | 5.108657 | 42 |
TCGGTGG | 15735 | 0.0 | 5.006277 | 48 |