Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945756.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 67945302 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 62985 | 0.0 | 9.609079 | 94-95 |
TGCCGTC | 49675 | 0.0 | 9.464037 | 94-95 |
CGTATGC | 81710 | 0.0 | 9.452745 | 94-95 |
CGCCGTA | 57885 | 0.0 | 9.450734 | 94-95 |
GCCGTCT | 45695 | 0.0 | 9.441377 | 94-95 |
GTATGCC | 72935 | 0.0 | 9.372485 | 94-95 |
GGTCGCC | 82180 | 0.0 | 9.231108 | 94-95 |
ATGCCGT | 56930 | 0.0 | 9.196372 | 94-95 |
GTCGCCG | 81050 | 0.0 | 9.09908 | 94-95 |
GCCGTAT | 55975 | 0.0 | 9.02665 | 94-95 |
TCGCCGT | 71270 | 0.0 | 8.572 | 94-95 |
CCGTATC | 52780 | 0.0 | 8.452914 | 94-95 |
TCGTATG | 97715 | 0.0 | 8.349126 | 94-95 |
TGGTCGC | 90400 | 0.0 | 7.945223 | 94-95 |
CGTATCA | 50165 | 0.0 | 7.9279904 | 94-95 |
CTCGTAT | 100535 | 0.0 | 7.2859635 | 94-95 |
CCGTCTT | 53800 | 0.0 | 7.171668 | 94-95 |
GTGGTCG | 106775 | 0.0 | 7.0078387 | 92-93 |
TCTCGTA | 114190 | 0.0 | 6.7420225 | 92-93 |
GGTGGTC | 114550 | 0.0 | 6.3746343 | 92-93 |