Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945643.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 82878776 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AATGCCG | 25125 | 0.0 | 5.7541003 | 13 |
GCGGTTC | 26100 | 0.0 | 5.4059763 | 31 |
ATCGGAA | 41025 | 0.0 | 5.274155 | 12 |
AGCGGTT | 26505 | 0.0 | 5.1914296 | 30 |
CGTGTAG | 20450 | 0.0 | 5.117638 | 25 |
GCCGTAT | 19635 | 0.0 | 5.1155434 | 57 |
GATCGGA | 43075 | 0.0 | 5.0941467 | 11 |