Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946226.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24981346 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 8825 | 0.0 | 14.379254 | 5 |
TACCGTG | 6900 | 0.0 | 13.690918 | 7 |
CCGTGAG | 6695 | 0.0 | 13.548533 | 9 |
CTATACT | 12405 | 0.0 | 13.525669 | 4 |
GTATAGA | 17295 | 0.0 | 13.471383 | 1 |
CTAGTAC | 8520 | 0.0 | 13.294278 | 3 |
TATACTG | 12365 | 0.0 | 12.999279 | 5 |
TCTATAC | 16050 | 0.0 | 12.972271 | 3 |
ATACCGT | 8075 | 0.0 | 12.920998 | 6 |
ACCGTGA | 8740 | 0.0 | 12.4218445 | 8 |
CATACAC | 66120 | 0.0 | 12.176202 | 3 |
ACATGAC | 53330 | 0.0 | 12.108789 | 8 |
CATGACA | 54225 | 0.0 | 11.804922 | 9 |
ACACATG | 67345 | 0.0 | 11.598751 | 6 |
GTACTAG | 10690 | 0.0 | 11.579922 | 1 |
CACATGA | 65825 | 0.0 | 11.316808 | 7 |
ACTGTGC | 3655 | 0.0 | 11.315685 | 8 |
TATACAG | 11215 | 0.0 | 11.273022 | 5 |
TAGTACT | 17125 | 0.0 | 11.197392 | 4 |
GTGTATG | 63080 | 0.0 | 11.125345 | 1 |