Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946186.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 39379136 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGAGC | 16430 | 0.0 | 14.646723 | 94 |
TATACCG | 14020 | 0.0 | 13.880318 | 5 |
CCGTGAG | 10815 | 0.0 | 13.294697 | 9 |
CTAGGCT | 10900 | 0.0 | 13.109443 | 4 |
TACCGTG | 11520 | 0.0 | 12.930462 | 7 |
CTAGTAC | 13290 | 0.0 | 12.874494 | 3 |
TCTATAC | 23740 | 0.0 | 12.731629 | 3 |
TAGGCTG | 12095 | 0.0 | 12.7083435 | 5 |
ACCGTGA | 14110 | 0.0 | 12.554375 | 8 |
TATACTG | 18225 | 0.0 | 12.405797 | 5 |
ATACCGT | 11785 | 0.0 | 12.240586 | 6 |
CTATACT | 19225 | 0.0 | 12.175874 | 4 |
GCTGTCC | 10655 | 0.0 | 11.862592 | 8 |
CTGTCCC | 13230 | 0.0 | 11.791303 | 9 |
GTACTAG | 18515 | 0.0 | 11.558112 | 1 |
TAGTACT | 26060 | 0.0 | 11.309158 | 4 |
GTATAGA | 24505 | 0.0 | 11.189562 | 1 |
CATACAC | 119755 | 0.0 | 10.872761 | 3 |
GTACTAC | 14735 | 0.0 | 10.8423195 | 6 |
GTCGCGC | 2940 | 0.0 | 10.707997 | 8 |