Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946132.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 35643532 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 12455 | 0.0 | 13.964567 | 5 |
GTCGCGC | 1865 | 0.0 | 12.852592 | 8 |
TATACTG | 16360 | 0.0 | 12.326606 | 5 |
CTAGTAC | 12435 | 0.0 | 12.135781 | 3 |
CTATACT | 17190 | 0.0 | 11.8145275 | 4 |
CATACAC | 91090 | 0.0 | 11.287209 | 3 |
ATACCGT | 10595 | 0.0 | 11.135474 | 6 |
TCTATAC | 20900 | 0.0 | 11.089427 | 3 |
TAGGCTG | 10685 | 0.0 | 11.086527 | 5 |
ACATGAC | 80510 | 0.0 | 10.90502 | 8 |
TATACAG | 15590 | 0.0 | 10.794597 | 5 |
GTACTAC | 13580 | 0.0 | 10.764567 | 6 |
TGTAGGG | 16730 | 0.0 | 10.7625 | 2 |
ACACATG | 90110 | 0.0 | 10.667344 | 6 |
GCTGTCC | 9150 | 0.0 | 10.632825 | 8 |
CATGACA | 83170 | 0.0 | 10.521722 | 9 |
CCGTGAG | 9305 | 0.0 | 10.4550905 | 9 |
CTAGGCT | 9355 | 0.0 | 10.452689 | 4 |
CACATGA | 88030 | 0.0 | 10.35848 | 7 |
CCTAGTA | 14555 | 0.0 | 10.335896 | 2 |