FastQCFastQC Report
Tue 15 Nov 2016
SRR1945917.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1945917.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19817304
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG156400.06.69622294-95
GATCGGA210650.06.166714794-95
ATCGGAA196400.05.900738294-95
CGGAAGA171800.05.778047694-95
GAGCGTC47300.05.573010494-95
TAGATCG104350.05.34814894-95