Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946135.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37791510 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 12025 | 0.0 | 15.011906 | 5 |
TACCGTG | 8895 | 0.0 | 13.314848 | 7 |
TCTATAC | 23015 | 0.0 | 13.075668 | 3 |
ATACCGT | 11040 | 0.0 | 13.069863 | 6 |
TATACTG | 17060 | 0.0 | 13.006267 | 5 |
CTATACT | 18870 | 0.0 | 12.558955 | 4 |
CCGTGAG | 9865 | 0.0 | 12.433748 | 9 |
GTACTAG | 15750 | 0.0 | 12.183182 | 1 |
GTATAGA | 25940 | 0.0 | 11.929907 | 1 |
ACCGTGA | 11685 | 0.0 | 11.583036 | 8 |
ACATGAC | 82820 | 0.0 | 11.524799 | 8 |
TATACAG | 16740 | 0.0 | 11.4857025 | 5 |
CATACAC | 108415 | 0.0 | 11.44143 | 3 |
CATGACA | 84450 | 0.0 | 11.163232 | 9 |
ACACATG | 108610 | 0.0 | 11.134525 | 6 |
CTAGTAC | 11695 | 0.0 | 11.01654 | 3 |
CACATGA | 106065 | 0.0 | 10.882731 | 7 |
GTATAGG | 12755 | 0.0 | 10.766722 | 1 |
TACTAGG | 17590 | 0.0 | 10.639376 | 2 |
CTATACC | 18160 | 0.0 | 10.512477 | 4 |