Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946205.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18318238 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 9260 | 0.0 | 15.22478 | 5 |
TATACCG | 6515 | 0.0 | 15.147663 | 5 |
CTAGTAC | 6730 | 0.0 | 14.805949 | 3 |
TCTATAC | 12040 | 0.0 | 14.444108 | 3 |
CTATACT | 9495 | 0.0 | 13.860488 | 4 |
GTATAGA | 12835 | 0.0 | 13.7903185 | 1 |
GTACTAG | 8060 | 0.0 | 13.783492 | 1 |
CATACAC | 44245 | 0.0 | 13.693175 | 3 |
TACCGTG | 4810 | 0.0 | 13.677662 | 7 |
ACATGAC | 34685 | 0.0 | 13.575361 | 8 |
ATACCGT | 5730 | 0.0 | 13.122005 | 6 |
GTGTATG | 44055 | 0.0 | 13.089505 | 1 |
CATGACA | 35700 | 0.0 | 12.965587 | 9 |
ACACATG | 44925 | 0.0 | 12.960391 | 6 |
GTATAGG | 6655 | 0.0 | 12.732298 | 1 |
TATACAG | 8805 | 0.0 | 12.488989 | 5 |
CACATGA | 43910 | 0.0 | 12.457144 | 7 |
TAGTACT | 12910 | 0.0 | 12.414911 | 4 |
TAATACT | 14710 | 0.0 | 12.205798 | 4 |
CCGTGCC | 1445 | 0.0 | 12.032561 | 9 |