Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946262.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30246664 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGACCGA | 25285 | 0.0 | 16.56483 | 94 |
TATACCG | 9390 | 0.0 | 16.318428 | 5 |
ATACCGT | 7475 | 0.0 | 15.401997 | 6 |
TACCGTG | 7255 | 0.0 | 15.026816 | 7 |
TCTATAC | 15625 | 0.0 | 14.710934 | 3 |
GTACTAG | 12905 | 0.0 | 14.290451 | 1 |
GTATAGA | 17350 | 0.0 | 14.289895 | 1 |
CCGTGAG | 9735 | 0.0 | 14.239119 | 9 |
CTATACT | 12545 | 0.0 | 13.638988 | 4 |
GTGTAGA | 26505 | 0.0 | 13.248449 | 94 |
CTAGTAC | 10070 | 0.0 | 13.070132 | 3 |
ACCGTGA | 11265 | 0.0 | 13.056583 | 8 |
GCGTGTA | 21815 | 0.0 | 12.76737 | 92-93 |
CGAGGGG | 4285 | 0.0 | 12.725634 | 94 |
TAGTACT | 18655 | 0.0 | 12.724699 | 4 |
CAGACCG | 23520 | 0.0 | 12.471411 | 92-93 |
GCAGACC | 24770 | 0.0 | 12.316491 | 92-93 |
TATACTG | 12790 | 0.0 | 12.311204 | 5 |
TAGACCG | 8000 | 0.0 | 12.220799 | 5 |
TATAGTG | 13100 | 0.0 | 12.163392 | 5 |