Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945953.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31093544 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGCGC | 1370 | 0.0 | 12.34811 | 8 |
TATACCG | 9735 | 0.0 | 11.106093 | 5 |
CTATACT | 14895 | 0.0 | 11.0142355 | 4 |
TATACTG | 14780 | 0.0 | 10.909105 | 5 |
TCTATAC | 18150 | 0.0 | 10.463398 | 3 |
TCGCGCG | 1850 | 0.0 | 10.414365 | 9 |
GTATATA | 43800 | 0.0 | 10.362098 | 1 |
CATACAC | 100160 | 0.0 | 10.278218 | 3 |
CCGTGCG | 1750 | 0.0 | 10.2039 | 9 |
TACCGTG | 7050 | 0.0 | 9.9981575 | 7 |
ACATGAC | 74175 | 0.0 | 9.990625 | 8 |
ACACATG | 97950 | 0.0 | 9.893094 | 6 |
TAGGCTG | 8855 | 0.0 | 9.661672 | 5 |
CACATGA | 94565 | 0.0 | 9.620393 | 7 |
CATGACA | 75485 | 0.0 | 9.611856 | 9 |
GTATAGA | 19535 | 0.0 | 9.606252 | 1 |
TAGACCG | 6605 | 0.0 | 9.465602 | 5 |
ATCATAC | 106575 | 0.0 | 9.302715 | 1 |
TCATACA | 109190 | 0.0 | 9.285751 | 2 |
TAGTACT | 16610 | 0.0 | 9.282686 | 4 |