Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946026.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36999598 |
Sequences flagged as poor quality | 0 |
Sequence length | 99 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 18145 | 0.0 | 13.787247 | 5 |
TATACCG | 11670 | 0.0 | 13.627227 | 5 |
GTCGCGC | 1505 | 0.0 | 13.594664 | 8 |
CTATACT | 19125 | 0.0 | 13.567038 | 4 |
CATACAC | 119580 | 0.0 | 13.279583 | 3 |
ACACATG | 118225 | 0.0 | 13.121062 | 6 |
GTATAGA | 23675 | 0.0 | 12.811762 | 1 |
ACATGAC | 90345 | 0.0 | 12.790117 | 8 |
CCGTGCG | 2330 | 0.0 | 12.572907 | 9 |
GTATAGG | 13870 | 0.0 | 12.443676 | 1 |
GTGTATG | 108600 | 0.0 | 12.439934 | 1 |
GTATATA | 49880 | 0.0 | 12.367114 | 1 |
CACATGA | 113935 | 0.0 | 12.2193165 | 7 |
CATGACA | 93320 | 0.0 | 12.202959 | 9 |
TCATACA | 129855 | 0.0 | 12.151032 | 2 |
TATACAG | 16750 | 0.0 | 12.131623 | 5 |
ATCATAC | 123725 | 0.0 | 11.972004 | 1 |
CTAGTAC | 11500 | 0.0 | 11.968676 | 3 |
TCTATAC | 22800 | 0.0 | 11.869718 | 3 |
GATTGAG | 97695 | 0.0 | 11.846903 | 7 |