Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945968.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 55012736 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 23330 | 0.0 | 7.9867177 | 94-95 |
TATGCCG | 30330 | 0.0 | 7.846936 | 94-95 |
GTATGCC | 35035 | 0.0 | 7.5939 | 94-95 |
ATGCCGT | 27445 | 0.0 | 7.5047703 | 94-95 |
GCCGTCT | 22740 | 0.0 | 7.4537067 | 94-95 |
CGTATGC | 41105 | 0.0 | 7.4280233 | 94-95 |
TCGTATG | 53300 | 0.0 | 6.5575066 | 94-95 |
GGTCGCC | 11635 | 0.0 | 6.389774 | 94-95 |
CTCGTAT | 57195 | 0.0 | 6.1845145 | 94-95 |
CCGATGT | 90680 | 0.0 | 5.628167 | 94-95 |
CGATGTA | 90965 | 0.0 | 5.6156735 | 94-95 |
TATCTCG | 75060 | 0.0 | 5.565968 | 94-95 |
CGCCGTA | 13790 | 0.0 | 5.340366 | 94-95 |
TCTCGTA | 67380 | 0.0 | 5.3017235 | 94-95 |
ACCGATG | 99285 | 0.0 | 5.255757 | 94-95 |
ATCTCGT | 82420 | 0.0 | 5.207926 | 94-95 |
CACCGAT | 104675 | 0.0 | 5.186137 | 94-95 |
CCGTCTT | 31375 | 0.0 | 5.1116977 | 94-95 |
TGGTCGC | 14625 | 0.0 | 5.1052856 | 92-93 |
GTATCTC | 80635 | 0.0 | 5.099962 | 94-95 |