Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946151.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30779844 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 15360 | 0.0 | 12.514654 | 5 |
CTATACT | 16115 | 0.0 | 11.315894 | 4 |
CATACAC | 89715 | 0.0 | 11.294608 | 3 |
TATACCG | 9915 | 0.0 | 11.186805 | 5 |
TATACAG | 15235 | 0.0 | 11.013174 | 5 |
ACATGAC | 65200 | 0.0 | 10.956722 | 8 |
GTATTAG | 17090 | 0.0 | 10.841023 | 1 |
ACACATG | 87355 | 0.0 | 10.792679 | 6 |
GTATATA | 45670 | 0.0 | 10.780323 | 1 |
GTATAGA | 21325 | 0.0 | 10.584451 | 1 |
GTATAGG | 11220 | 0.0 | 10.519546 | 1 |
TCTATAC | 19390 | 0.0 | 10.495365 | 3 |
CATGACA | 66815 | 0.0 | 10.487912 | 9 |
CACATGA | 84110 | 0.0 | 10.437918 | 7 |
TCATACA | 97085 | 0.0 | 10.262942 | 2 |
TAATACT | 25140 | 0.0 | 10.151309 | 4 |
ACTGTGC | 5200 | 0.0 | 10.032388 | 8 |
GTGTATG | 84255 | 0.0 | 9.962278 | 1 |
TAGGCTG | 8455 | 0.0 | 9.8944845 | 5 |
ATCATAC | 96670 | 0.0 | 9.889214 | 1 |