Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946146.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 50429324 |
Sequences flagged as poor quality | 0 |
Sequence length | 21-100 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 23500 | 0.0 | 12.333336 | 5 |
CTAGTAC | 15480 | 0.0 | 12.164057 | 3 |
CTATACT | 25710 | 0.0 | 11.344981 | 4 |
TATACCG | 14850 | 0.0 | 11.343713 | 5 |
CATACAC | 139160 | 0.0 | 11.133357 | 3 |
TCTATAC | 30865 | 0.0 | 10.810884 | 3 |
GTATAGA | 33700 | 0.0 | 10.796945 | 1 |
GTACTAG | 20530 | 0.0 | 10.773358 | 1 |
TACACAT | 144580 | 0.0 | 10.7702465 | 5 |
TACCGTG | 11295 | 0.0 | 10.705349 | 7 |
GACCGTG | 7040 | 0.0 | 10.620089 | 7 |
GTATAGG | 17210 | 0.0 | 10.597924 | 1 |
ACACATG | 136030 | 0.0 | 10.588805 | 6 |
ACATGAC | 120530 | 0.0 | 10.487726 | 8 |
TAGTACT | 30105 | 0.0 | 10.409262 | 4 |
CCGTGAG | 12200 | 0.0 | 10.402969 | 9 |
GCCGTGC | 4850 | 0.0 | 10.37216 | 8 |
TAGACCG | 10990 | 0.0 | 10.330615 | 5 |
CATGACA | 122295 | 0.0 | 10.166545 | 9 |
CACATGA | 131920 | 0.0 | 10.04054 | 7 |