Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946033.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29165766 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 36 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 9905 | 0.0 | 14.769787 | 5 |
CCGTGAG | 7555 | 0.0 | 14.502821 | 9 |
TACCGTG | 7425 | 0.0 | 13.604563 | 7 |
ATACCGT | 8100 | 0.0 | 13.46119 | 6 |
TCTATAC | 16230 | 0.0 | 13.321958 | 3 |
ACCGTGA | 10030 | 0.0 | 13.16365 | 8 |
TAGACCG | 7335 | 0.0 | 12.120766 | 5 |
CTAGTAC | 9655 | 0.0 | 12.099664 | 3 |
GTCGCGC | 1285 | 0.0 | 12.066511 | 8 |
GTACTAC | 10320 | 0.0 | 12.022776 | 6 |
TATACTG | 11575 | 0.0 | 11.907346 | 5 |
CTAGGCT | 7000 | 0.0 | 11.843304 | 4 |
TAGGCTG | 7725 | 0.0 | 11.569736 | 5 |
AGACCGT | 6410 | 0.0 | 11.364601 | 6 |
GACCGTG | 4755 | 0.0 | 11.362919 | 7 |
CTATACC | 13580 | 0.0 | 11.342431 | 4 |
GTATAGA | 17955 | 0.0 | 11.259365 | 1 |
TAGTACT | 18625 | 0.0 | 11.102645 | 4 |
TGTAGGG | 13160 | 0.0 | 10.846018 | 2 |
CTATACT | 13345 | 0.0 | 10.730333 | 4 |