Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946134.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37064524 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 18195 | 0.0 | 12.401671 | 5 |
TATACCG | 11565 | 0.0 | 12.357169 | 5 |
TCTATAC | 22700 | 0.0 | 11.848593 | 3 |
TATACAG | 17090 | 0.0 | 11.415556 | 5 |
GTATAGA | 23980 | 0.0 | 11.257333 | 1 |
CATACAC | 107825 | 0.0 | 11.238065 | 3 |
TAGGCTG | 11175 | 0.0 | 11.189873 | 5 |
CTATACT | 19385 | 0.0 | 11.182314 | 4 |
ACATGAC | 82020 | 0.0 | 10.817672 | 8 |
GTATTAG | 20490 | 0.0 | 10.74179 | 1 |
TACCGTG | 8410 | 0.0 | 10.673507 | 7 |
ACACATG | 106370 | 0.0 | 10.652797 | 6 |
GTATATA | 51990 | 0.0 | 10.610869 | 1 |
CTAGGCT | 10295 | 0.0 | 10.550722 | 4 |
CATGACA | 83850 | 0.0 | 10.514238 | 9 |
CACATGA | 102030 | 0.0 | 10.294835 | 7 |
TCATACA | 116265 | 0.0 | 10.187718 | 2 |
TAGACTG | 9240 | 0.0 | 10.124467 | 5 |
CTGTCCC | 11850 | 0.0 | 9.954133 | 9 |
GTGTATG | 104125 | 0.0 | 9.891494 | 1 |