Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946145.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 32653572 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 17085 | 0.0 | 13.451855 | 5 |
TATACCG | 11170 | 0.0 | 13.001505 | 5 |
CCGTGCG | 2320 | 0.0 | 12.559934 | 9 |
CTATACT | 18005 | 0.0 | 12.190234 | 4 |
CATACAC | 97790 | 0.0 | 11.837453 | 3 |
GTATAGA | 22820 | 0.0 | 11.477133 | 1 |
TACCGTG | 9000 | 0.0 | 11.436328 | 7 |
TCTATAC | 22055 | 0.0 | 11.400792 | 3 |
ATACCGT | 10380 | 0.0 | 11.228989 | 6 |
ACACATG | 100785 | 0.0 | 11.098579 | 6 |
ACATGAC | 80860 | 0.0 | 11.089917 | 8 |
CACATGA | 97325 | 0.0 | 10.821874 | 7 |
CATGACA | 82940 | 0.0 | 10.772135 | 9 |
GTATTAG | 19070 | 0.0 | 10.676553 | 1 |
TCATACA | 107775 | 0.0 | 10.561991 | 2 |
GTATAGG | 12595 | 0.0 | 10.490641 | 1 |
GTATATA | 46935 | 0.0 | 10.469196 | 1 |
TAGACTG | 8130 | 0.0 | 10.463485 | 5 |
ATCATAC | 105365 | 0.0 | 10.268668 | 1 |
CTAGTAC | 10210 | 0.0 | 10.081072 | 3 |