Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946056.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 86502176 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGCATT | 12250 | 0.0 | 8.104613 | 1 |
CGAGATC | 29735 | 0.0 | 6.380168 | 18 |
AATGCCG | 15570 | 0.0 | 6.3276963 | 13 |
CGCCGTA | 8260 | 0.0 | 6.2315702 | 66 |
GGTCGCC | 9720 | 0.0 | 5.881425 | 63 |
GCCGTAT | 9275 | 0.0 | 5.848465 | 67 |
GAGACCG | 17900 | 0.0 | 5.595374 | 50 |
CGAGACC | 18260 | 0.0 | 5.539955 | 49 |
CCGAGAT | 38530 | 0.0 | 5.2682614 | 17 |
GAGATCG | 36010 | 0.0 | 5.2200537 | 19 |
GAGCGGT | 19960 | 0.0 | 5.1114006 | 29 |