Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945884.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 39312314 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 31270 | 0.0 | 9.447842 | 94-95 |
ATGCCGT | 27495 | 0.0 | 9.27309 | 94-95 |
GGTCGCC | 38885 | 0.0 | 9.146547 | 94-95 |
CGTATGC | 39750 | 0.0 | 9.013389 | 94-95 |
GCCGTCT | 22795 | 0.0 | 8.981473 | 94-95 |
TGCCGTC | 24045 | 0.0 | 8.969993 | 94-95 |
GTATGCC | 35940 | 0.0 | 8.92233 | 94-95 |
CGCCGTA | 25530 | 0.0 | 8.830552 | 94-95 |
GTCGCCG | 38940 | 0.0 | 8.827951 | 94-95 |
GCCGTAT | 25290 | 0.0 | 8.55665 | 94-95 |
CCGTATC | 23860 | 0.0 | 7.8422527 | 94-95 |
TCGCCGT | 32035 | 0.0 | 7.7434 | 94-95 |
TCGTATG | 47840 | 0.0 | 7.7379856 | 94-95 |
TGGTCGC | 41695 | 0.0 | 7.6838584 | 92-93 |
TCTCGGG | 13885 | 0.0 | 7.6467643 | 94-95 |
CCGTCTT | 27395 | 0.0 | 7.134451 | 94-95 |
CTCGTAT | 52030 | 0.0 | 7.1281333 | 92-93 |
CGTATCA | 23465 | 0.0 | 7.0916176 | 94-95 |
GTGGTCG | 50610 | 0.0 | 6.7727575 | 92-93 |
TCTCGTA | 59495 | 0.0 | 6.437936 | 92-93 |