Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946265.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 32167698 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 11240 | 0.0 | 14.017073 | 5 |
ATACCGT | 9665 | 0.0 | 11.724082 | 6 |
TACCGTG | 8560 | 0.0 | 11.644905 | 7 |
TCTATAC | 19590 | 0.0 | 11.522472 | 3 |
TATACTG | 15280 | 0.0 | 11.0496855 | 5 |
GTATAGA | 21220 | 0.0 | 10.88786 | 1 |
GTATATA | 46135 | 0.0 | 10.852194 | 1 |
CCGTGAG | 6860 | 0.0 | 10.760467 | 9 |
CATACAC | 90300 | 0.0 | 10.660289 | 3 |
CTATACT | 15875 | 0.0 | 10.279857 | 4 |
CCGTGCG | 2320 | 0.0 | 10.13299 | 9 |
ACACATG | 88760 | 0.0 | 10.101761 | 6 |
CTATACC | 16255 | 0.0 | 10.068474 | 4 |
ACATGAC | 68625 | 0.0 | 10.050784 | 8 |
TATACAG | 14270 | 0.0 | 9.953178 | 5 |
GTATTAG | 18405 | 0.0 | 9.9453535 | 1 |
CACATGA | 84640 | 0.0 | 9.771563 | 7 |
GTGTATG | 88660 | 0.0 | 9.733702 | 1 |
CATGACA | 71270 | 0.0 | 9.684448 | 9 |
GCTGTCC | 8055 | 0.0 | 9.514242 | 8 |