Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946195.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23460062 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 8325 | 0.0 | 19.533384 | 5 |
CCGTGAG | 6305 | 0.0 | 17.81548 | 9 |
ATACCGT | 7715 | 0.0 | 17.60543 | 6 |
TACCGTG | 6060 | 0.0 | 17.2173 | 7 |
TCTATAC | 14975 | 0.0 | 15.6609955 | 3 |
GTCGCGC | 1030 | 0.0 | 15.514095 | 8 |
ACCGTGA | 8605 | 0.0 | 15.129118 | 8 |
TATACTG | 11220 | 0.0 | 14.619018 | 5 |
CATACAC | 67185 | 0.0 | 14.51548 | 3 |
ACATGAC | 52550 | 0.0 | 14.461788 | 8 |
CTATACT | 11885 | 0.0 | 14.394211 | 4 |
CTATACC | 12300 | 0.0 | 14.367075 | 4 |
GTATAGA | 16580 | 0.0 | 14.253328 | 1 |
CATGACA | 53665 | 0.0 | 13.9598875 | 9 |
ACACATG | 67300 | 0.0 | 13.904037 | 6 |
CACATGA | 64420 | 0.0 | 13.423998 | 7 |
CTAGTAC | 8810 | 0.0 | 13.336741 | 3 |
TCATACA | 74655 | 0.0 | 12.855308 | 2 |
GTGTATG | 61080 | 0.0 | 12.701507 | 1 |
GTACTAG | 9990 | 0.0 | 12.4404335 | 1 |