Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946210.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24014528 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 9320 | 0.0 | 18.25252 | 5 |
ATACCGT | 8105 | 0.0 | 16.291899 | 6 |
GTCGCGC | 1050 | 0.0 | 15.663442 | 8 |
TATACTG | 11920 | 0.0 | 15.453967 | 5 |
TACCGTG | 6965 | 0.0 | 15.449894 | 7 |
TCTATAC | 15805 | 0.0 | 15.22674 | 3 |
CCGTGAG | 6040 | 0.0 | 15.170686 | 9 |
CTATACT | 11785 | 0.0 | 14.836956 | 4 |
GTATAGA | 17200 | 0.0 | 14.668939 | 1 |
CATACAC | 68510 | 0.0 | 14.346023 | 3 |
ACCGTGA | 8085 | 0.0 | 14.065131 | 8 |
GTGTATG | 62845 | 0.0 | 13.924223 | 1 |
ACACATG | 70340 | 0.0 | 13.661844 | 6 |
GCCGTGC | 2590 | 0.0 | 13.607238 | 8 |
TATACAG | 10640 | 0.0 | 13.558975 | 5 |
ACATGAC | 53180 | 0.0 | 13.37784 | 8 |
CTATACC | 12730 | 0.0 | 13.107848 | 4 |
CATGACA | 54585 | 0.0 | 12.990428 | 9 |
CACATGA | 65830 | 0.0 | 12.934376 | 7 |
TCATACA | 75440 | 0.0 | 12.847494 | 2 |