Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946108.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37042948 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGCGC | 1820 | 0.0 | 16.516853 | 8 |
TATACTG | 17445 | 0.0 | 12.304401 | 5 |
GCGGGCG | 3675 | 0.0 | 12.300946 | 94 |
TATACCG | 12105 | 0.0 | 12.028519 | 5 |
TATGAGC | 15860 | 0.0 | 11.905997 | 94 |
CTATACT | 18395 | 0.0 | 11.726993 | 4 |
TCGCGCG | 2620 | 0.0 | 11.114991 | 9 |
TCTATAC | 20690 | 0.0 | 10.992973 | 3 |
TAGACCG | 9765 | 0.0 | 10.918648 | 5 |
GTATAGA | 22935 | 0.0 | 10.838322 | 1 |
TAGACAG | 12275 | 0.0 | 10.752267 | 5 |
GTACTAG | 14305 | 0.0 | 10.696023 | 1 |
CATACAC | 89670 | 0.0 | 10.654192 | 3 |
GACAGCG | 4230 | 0.0 | 10.548759 | 7 |
GTATAGG | 13070 | 0.0 | 10.482002 | 1 |
AGGTCGC | 3580 | 0.0 | 10.364831 | 6 |
GTATATA | 50730 | 0.0 | 10.328973 | 1 |
CTAGTAC | 12160 | 0.0 | 10.20236 | 3 |
ACAGTGC | 7150 | 0.0 | 10.182265 | 8 |
TAGGCTG | 11665 | 0.0 | 10.146844 | 5 |