Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946074.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 62440766 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGCATT | 9510 | 0.0 | 7.058708 | 1 |
CGAGATC | 21115 | 0.0 | 5.6803584 | 18 |
AATGCCG | 12265 | 0.0 | 5.672271 | 13 |
GAGCGGT | 13210 | 0.0 | 5.2962275 | 29 |
CGTATGC | 7125 | 0.0 | 5.2138 | 61 |
GAGACCG | 13110 | 0.0 | 5.2082667 | 50 |
TGCCGAG | 14990 | 0.0 | 5.2021413 | 15 |
TATGCCG | 5930 | 0.0 | 5.2007356 | 63 |
GAGCGTC | 8225 | 0.0 | 5.188757 | 29 |
TCGGAAG | 22980 | 0.0 | 5.1740236 | 23 |
GAGATCG | 23635 | 0.0 | 5.1634345 | 19 |
AAGAGCG | 23110 | 0.0 | 5.1305094 | 27 |
CGAGACC | 13595 | 0.0 | 5.074032 | 49 |
AGAGCGG | 14800 | 0.0 | 5.0338974 | 28 |