Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945787.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28315058 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 5005 | 0.0 | 7.011519 | 48-49 |
GAGCACA | 12760 | 0.0 | 6.4477196 | 9 |
TATGCCG | 5415 | 0.0 | 6.348732 | 46-47 |
GCCGTCT | 5630 | 0.0 | 6.2755556 | 48-49 |
TCGGAAG | 14295 | 0.0 | 6.1371765 | 3 |
GCACACG | 6785 | 0.0 | 6.097355 | 10-11 |
AGAGCAC | 13835 | 0.0 | 6.084717 | 8 |
ATGCCGT | 5630 | 0.0 | 6.0214753 | 46-47 |
CGTATGC | 7035 | 0.0 | 5.191393 | 44-45 |
GTATGCC | 6660 | 0.0 | 5.1611304 | 44-45 |
CACACGT | 8665 | 0.0 | 5.015189 | 12-13 |