Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946150.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34874814 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 11505 | 0.0 | 14.583723 | 5 |
TCTATAC | 22210 | 0.0 | 12.52739 | 3 |
CTATACT | 17160 | 0.0 | 11.996216 | 4 |
GTCGCGC | 1390 | 0.0 | 11.834164 | 8 |
TATACTG | 16190 | 0.0 | 11.72793 | 5 |
CATACAC | 88505 | 0.0 | 11.725159 | 3 |
GTATAGA | 22270 | 0.0 | 11.591679 | 1 |
CCGTGAG | 8940 | 0.0 | 11.513098 | 9 |
TACCGTG | 8655 | 0.0 | 11.457792 | 7 |
ATACCGT | 10555 | 0.0 | 11.309991 | 6 |
CTAGTAC | 11230 | 0.0 | 11.299818 | 3 |
TAGGCTG | 9940 | 0.0 | 11.15867 | 5 |
ACATGAC | 79080 | 0.0 | 10.9057045 | 8 |
TAGTACT | 20570 | 0.0 | 10.89862 | 4 |
CTAGGCT | 8595 | 0.0 | 10.826966 | 4 |
ACCGTGA | 11665 | 0.0 | 10.757487 | 8 |
ACACATG | 88900 | 0.0 | 10.689717 | 6 |
CATGACA | 80065 | 0.0 | 10.607206 | 9 |
CTATACC | 17295 | 0.0 | 10.543835 | 4 |
GTACTAC | 11980 | 0.0 | 10.435461 | 6 |