Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946095.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22289512 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCCGTA | 3155 | 0.0 | 20.632076 | 66 |
CGGCATT | 4440 | 0.0 | 20.254972 | 1 |
TATGCCG | 3030 | 0.0 | 19.87113 | 63 |
GGTCGCC | 3310 | 0.0 | 19.670786 | 63 |
GCCGTAT | 3605 | 0.0 | 18.332836 | 67 |
CCTGCTG | 6425 | 0.0 | 16.38191 | 8 |
TGCCGTC | 3690 | 0.0 | 16.312838 | 65 |
CGTATGC | 3675 | 0.0 | 16.207216 | 61 |
ATGCCGT | 3720 | 0.0 | 16.182991 | 64 |
TGGTCGC | 4110 | 0.0 | 16.026394 | 62 |
GCCGTCT | 3930 | 0.0 | 15.672905 | 66 |
GTATGCC | 4010 | 0.0 | 15.55233 | 62 |
CCGTATC | 4380 | 0.0 | 15.168847 | 68 |
GCTGAAC | 7080 | 0.0 | 15.054069 | 11 |
GGCATTC | 7180 | 0.0 | 14.756571 | 2 |
GCATTCC | 7585 | 0.0 | 14.521696 | 3 |
TGAACCG | 7845 | 0.0 | 13.629409 | 13 |
ATTCCTG | 8000 | 0.0 | 13.547889 | 5 |
CGAGATC | 10080 | 0.0 | 13.111812 | 18 |
CCGAGAT | 10215 | 0.0 | 12.836667 | 17 |