Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945958.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 90036958 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGGAAG | 47000 | 0.0 | 6.1807246 | 4 |
GGTCGCC | 11370 | 0.0 | 5.353544 | 44-45 |
TATGCCG | 13810 | 0.0 | 5.1820664 | 48-49 |
AGAGCGT | 26600 | 0.0 | 5.1627316 | 9 |
GCCGTCT | 14745 | 0.0 | 5.136256 | 52-53 |
TGCCGTC | 13695 | 0.0 | 5.1116133 | 50-51 |
GATCGGA | 62545 | 0.0 | 5.0724125 | 2 |
ATGCCGT | 14510 | 0.0 | 5.0673475 | 50-51 |