Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946059.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 137560464 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 24645 | 0.0 | 7.304928 | 48-49 |
TATGCCG | 26975 | 0.0 | 7.2492433 | 46-47 |
GCCGTCT | 26855 | 0.0 | 6.8875623 | 48-49 |
ATGCCGT | 26845 | 0.0 | 6.8728533 | 46-47 |
CGTATGC | 33275 | 0.0 | 5.898283 | 44-45 |
GTATGCC | 33700 | 0.0 | 5.754151 | 44-45 |