Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946029.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34009160 |
Sequences flagged as poor quality | 0 |
Sequence length | 99 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 11055 | 0.0 | 13.418023 | 5 |
TATACTG | 17605 | 0.0 | 13.312238 | 5 |
CATACAC | 92945 | 0.0 | 13.1128645 | 3 |
CTATACT | 18405 | 0.0 | 13.087314 | 4 |
ACACATG | 91580 | 0.0 | 12.815787 | 6 |
ACATGAC | 78370 | 0.0 | 12.383095 | 8 |
TCTATAC | 22125 | 0.0 | 12.189932 | 3 |
TATACAG | 15885 | 0.0 | 12.177627 | 5 |
GTGTATG | 87165 | 0.0 | 11.896766 | 1 |
ACCGTGC | 4255 | 0.0 | 11.802684 | 8 |
CATGACA | 80990 | 0.0 | 11.79876 | 9 |
CACATGA | 88065 | 0.0 | 11.753803 | 7 |
GTATATA | 48655 | 0.0 | 11.713038 | 1 |
TCATACA | 102825 | 0.0 | 11.699341 | 2 |
ATCATAC | 96115 | 0.0 | 11.582771 | 1 |
GTATAGG | 12100 | 0.0 | 11.496001 | 1 |
GTATAGA | 22820 | 0.0 | 11.253417 | 1 |
TAGACCG | 6355 | 0.0 | 10.90253 | 5 |
TATACTA | 31395 | 0.0 | 10.871568 | 5 |
GTATTAG | 21570 | 0.0 | 10.870295 | 1 |