Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945971.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 41511012 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATGC | 34255 | 0.0 | 8.080601 | 94-95 |
GTATGCC | 28875 | 0.0 | 7.2654886 | 94-95 |
TATGCCG | 24655 | 0.0 | 7.164517 | 94-95 |
TGCCGTC | 19795 | 0.0 | 6.7345095 | 94-95 |
GGTCGCC | 9245 | 0.0 | 6.659161 | 94-95 |
TCGTATG | 43700 | 0.0 | 6.648386 | 94-95 |
GCCGTCT | 19170 | 0.0 | 6.497058 | 94-95 |
ATGCCGT | 22955 | 0.0 | 6.354136 | 94-95 |
CTCGTAT | 44420 | 0.0 | 6.001134 | 92-93 |
CGCCGTA | 10915 | 0.0 | 5.813854 | 94-95 |
GTCGCCG | 12820 | 0.0 | 5.1900477 | 94-95 |
CACTTGA | 88800 | 0.0 | 5.170326 | 94-95 |
TCTCGTA | 51620 | 0.0 | 5.1457458 | 92-93 |