Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946281.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 42054074 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 13815 | 0.0 | 14.36004 | 5 |
CTGAGCG | 11090 | 0.0 | 13.366592 | 94 |
TATACTG | 20330 | 0.0 | 13.1804905 | 5 |
CTAGTAC | 12890 | 0.0 | 13.092831 | 3 |
TACCGTG | 10290 | 0.0 | 13.065473 | 7 |
CTATACT | 21220 | 0.0 | 12.89351 | 4 |
TCTATAC | 26005 | 0.0 | 12.834931 | 3 |
CATACAC | 116650 | 0.0 | 12.577696 | 3 |
ATACCGT | 12195 | 0.0 | 12.566591 | 6 |
GTATAGA | 28240 | 0.0 | 12.476709 | 1 |
ACATGAC | 86795 | 0.0 | 12.190838 | 8 |
TAGTACT | 25155 | 0.0 | 12.091315 | 4 |
ACACATG | 110725 | 0.0 | 11.972507 | 6 |
GTATAGG | 13940 | 0.0 | 11.912281 | 1 |
TATACAG | 19405 | 0.0 | 11.798027 | 5 |
CATGACA | 89605 | 0.0 | 11.749964 | 9 |
GTACTAG | 15180 | 0.0 | 11.71394 | 1 |
GTGTATG | 112555 | 0.0 | 11.568692 | 1 |
CACATGA | 105580 | 0.0 | 11.3179655 | 7 |
TCATACA | 129190 | 0.0 | 11.052476 | 2 |