Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946466.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24974468 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 8405 | 0.0 | 12.692571 | 5 |
GTATAGA | 17950 | 0.0 | 11.270611 | 1 |
TATACTG | 13095 | 0.0 | 11.197229 | 5 |
TCTATAC | 16840 | 0.0 | 10.688534 | 3 |
GTATAGG | 9205 | 0.0 | 10.631218 | 1 |
CCGTGCG | 1775 | 0.0 | 10.591065 | 9 |
ATACCGT | 8260 | 0.0 | 10.468856 | 6 |
CTATACT | 13040 | 0.0 | 10.3794985 | 4 |
CCGTGAG | 6980 | 0.0 | 10.167157 | 9 |
ACCGTGA | 8585 | 0.0 | 10.127464 | 8 |
TATACAG | 11495 | 0.0 | 10.057444 | 5 |
GACCGTG | 4070 | 0.0 | 10.045862 | 7 |
TACCGTG | 6805 | 0.0 | 9.944816 | 7 |
CATACAC | 55260 | 0.0 | 9.916288 | 3 |
GTATATA | 36760 | 0.0 | 9.855045 | 1 |
GTATTAG | 15315 | 0.0 | 9.769078 | 1 |
GTATTAC | 11455 | 0.0 | 9.569831 | 1 |
TAATACT | 19255 | 0.0 | 9.567622 | 4 |
CTAGTAC | 8300 | 0.0 | 9.512456 | 3 |
CCTAGAC | 5810 | 0.0 | 9.463923 | 3 |