Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946305.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 41366492 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 12890 | 0.0 | 12.256256 | 5 |
CTAGTAC | 15580 | 0.0 | 11.80068 | 3 |
TAGACCG | 10660 | 0.0 | 11.732644 | 5 |
CCGTGAG | 10880 | 0.0 | 10.80077 | 9 |
ATACCGT | 10915 | 0.0 | 10.765993 | 6 |
TATACTG | 19510 | 0.0 | 10.555731 | 5 |
AGACCGT | 11035 | 0.0 | 10.478535 | 6 |
CATACAC | 141740 | 0.0 | 10.456626 | 3 |
ACATGAC | 101090 | 0.0 | 10.401554 | 8 |
ACACATG | 134610 | 0.0 | 10.273139 | 6 |
CTATACT | 19580 | 0.0 | 10.086676 | 4 |
CACATGA | 128910 | 0.0 | 10.04948 | 7 |
GTATAGA | 25500 | 0.0 | 10.039859 | 1 |
GACCGTG | 8710 | 0.0 | 10.037967 | 7 |
TCTATAC | 23845 | 0.0 | 10.037331 | 3 |
ACCGTGA | 14660 | 0.0 | 10.00371 | 8 |
GTACTAG | 18510 | 0.0 | 9.890359 | 1 |
CATGACA | 105550 | 0.0 | 9.877498 | 9 |
CCTAGTA | 16810 | 0.0 | 9.760849 | 2 |
TCATACA | 154180 | 0.0 | 9.693763 | 2 |