Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946389.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29291556 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 10535 | 0.0 | 13.248207 | 5 |
ATACCGT | 8490 | 0.0 | 12.896845 | 6 |
TACCGTG | 7355 | 0.0 | 12.395052 | 7 |
CCGTGAG | 6850 | 0.0 | 11.731014 | 9 |
GTATAGA | 18820 | 0.0 | 11.318966 | 1 |
TCTATAC | 16735 | 0.0 | 10.617279 | 3 |
GTCGCGC | 1815 | 0.0 | 10.615403 | 8 |
AGACCGG | 8120 | 0.0 | 10.477557 | 94 |
TATACTG | 13360 | 0.0 | 10.270973 | 5 |
ACCGTGA | 9995 | 0.0 | 9.96741 | 8 |
CATACAC | 108250 | 0.0 | 9.948195 | 3 |
ACATGAC | 85135 | 0.0 | 9.758956 | 8 |
ACACATG | 108635 | 0.0 | 9.598928 | 6 |
CACATGA | 104830 | 0.0 | 9.359963 | 7 |
CTGAGCG | 20085 | 0.0 | 9.337671 | 94 |
GTACTAG | 13100 | 0.0 | 9.297295 | 1 |
GCTGTCC | 7190 | 0.0 | 9.280871 | 8 |
TCATACA | 115290 | 0.0 | 9.266188 | 2 |
GTATTAT | 23610 | 0.0 | 9.26158 | 1 |
TAGGCGG | 6565 | 0.0 | 9.236514 | 4 |