Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946358.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 43371708 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACCGTG | 11290 | 0.0 | 16.438805 | 7 |
TATACCG | 14050 | 0.0 | 16.33595 | 5 |
ATACCGT | 12605 | 0.0 | 14.952817 | 6 |
CCGTGAG | 10010 | 0.0 | 14.889156 | 9 |
TATACTG | 19915 | 0.0 | 14.71325 | 5 |
TCTATAC | 26190 | 0.0 | 14.080015 | 3 |
CTATACT | 21545 | 0.0 | 12.961803 | 4 |
GTATAGA | 29645 | 0.0 | 12.711778 | 1 |
ACCGTGA | 13250 | 0.0 | 12.623642 | 8 |
CTATACC | 20140 | 0.0 | 12.603366 | 4 |
TAGGCTG | 11405 | 0.0 | 11.711808 | 5 |
TAGTACT | 24310 | 0.0 | 11.603769 | 4 |
CTAGTAC | 13460 | 0.0 | 11.581365 | 3 |
GTGTATG | 88270 | 0.0 | 10.934442 | 1 |
TAATACT | 34340 | 0.0 | 10.83388 | 4 |
GTATATA | 60525 | 0.0 | 10.833586 | 1 |
CTAGGCT | 10535 | 0.0 | 10.817778 | 4 |
TATGCTG | 14435 | 0.0 | 10.65447 | 5 |
CATACAC | 95755 | 0.0 | 10.559598 | 3 |
ATACTGT | 19740 | 0.0 | 10.524383 | 6 |