Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946295.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22878084 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTATACT | 12175 | 0.0 | 13.975799 | 4 |
TCTATAC | 14625 | 0.0 | 13.820051 | 3 |
TATACTG | 11870 | 0.0 | 13.817399 | 5 |
TATACCG | 6845 | 0.0 | 13.250596 | 5 |
CTAGTAC | 7140 | 0.0 | 12.968956 | 3 |
ACATGAC | 44835 | 0.0 | 12.514325 | 8 |
CATACAC | 57710 | 0.0 | 12.347673 | 3 |
CCGTGCG | 1315 | 0.0 | 12.149895 | 9 |
ACACATG | 53000 | 0.0 | 12.049567 | 6 |
GTGTATG | 55495 | 0.0 | 12.0290985 | 1 |
GTATATA | 32270 | 0.0 | 12.020955 | 1 |
GTATAGA | 15125 | 0.0 | 11.983289 | 1 |
CATGACA | 46140 | 0.0 | 11.966844 | 9 |
TAGTACT | 13060 | 0.0 | 11.625092 | 4 |
TATACAG | 10310 | 0.0 | 11.577816 | 5 |
CCGTGCC | 1870 | 0.0 | 11.559407 | 9 |
CACATGA | 50795 | 0.0 | 11.545606 | 7 |
TAATACT | 18245 | 0.0 | 11.515974 | 4 |
TAGGGTG | 5500 | 0.0 | 11.278799 | 5 |
GCCGTGC | 2630 | 0.0 | 11.256545 | 8 |