Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946366.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37842500 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 18985 | 0.0 | 22.15315 | 5 |
TACCGTG | 16790 | 0.0 | 21.467358 | 7 |
CCGTGAG | 15165 | 0.0 | 21.231787 | 9 |
ATACCGT | 17445 | 0.0 | 21.224833 | 6 |
ACCGTGA | 18400 | 0.0 | 18.697945 | 8 |
TCTATAC | 30230 | 0.0 | 18.6035 | 3 |
CTATACC | 25585 | 0.0 | 16.879562 | 4 |
CTAGTAC | 15610 | 0.0 | 16.660301 | 3 |
GTATAGA | 30730 | 0.0 | 16.007906 | 1 |
GTCGCGC | 1660 | 0.0 | 15.551143 | 8 |
GTACTAG | 23350 | 0.0 | 14.507708 | 1 |
CTATACT | 19340 | 0.0 | 14.4174595 | 4 |
GTACTAC | 17385 | 0.0 | 14.225717 | 6 |
TATACTG | 18485 | 0.0 | 14.194839 | 5 |
TACTAGG | 25185 | 0.0 | 13.608069 | 2 |
CCTAGTA | 17965 | 0.0 | 13.589132 | 2 |
TAGTACT | 33955 | 0.0 | 12.801653 | 4 |
CTAGGCT | 9705 | 0.0 | 12.769302 | 4 |
TAGGATG | 28125 | 0.0 | 12.750844 | 5 |
GAGCGCG | 2040 | 0.0 | 12.653207 | 7 |