Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946273.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37055772 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 13205 | 0.0 | 14.777598 | 5 |
TACCGTG | 9640 | 0.0 | 14.141093 | 7 |
CCGTGAG | 8255 | 0.0 | 13.267322 | 9 |
ATACCGT | 11545 | 0.0 | 12.947601 | 6 |
TCTATAC | 23095 | 0.0 | 12.33885 | 3 |
CTATACT | 18090 | 0.0 | 11.697794 | 4 |
GTATAGA | 25125 | 0.0 | 11.649618 | 1 |
ACCGTGA | 11600 | 0.0 | 11.427071 | 8 |
TATACTG | 17880 | 0.0 | 11.04526 | 5 |
GTCGCGC | 1335 | 0.0 | 10.915013 | 8 |
CTAGTAC | 11105 | 0.0 | 10.840303 | 3 |
CATACAC | 116515 | 0.0 | 10.565932 | 3 |
ACATGAC | 90895 | 0.0 | 10.332355 | 8 |
CTATACC | 17825 | 0.0 | 10.288808 | 4 |
ACACATG | 117860 | 0.0 | 10.182175 | 6 |
TAGTACT | 22315 | 0.0 | 10.178417 | 4 |
CACATGA | 114390 | 0.0 | 9.850131 | 7 |
CATGACA | 95085 | 0.0 | 9.807856 | 9 |
TCATACA | 128830 | 0.0 | 9.649156 | 2 |
GTATATA | 54880 | 0.0 | 9.646412 | 1 |