Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946371.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 41750846 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 15105 | 0.0 | 17.555962 | 5 |
TCTATAC | 27660 | 0.0 | 15.527749 | 3 |
ATACCGT | 14300 | 0.0 | 15.259031 | 6 |
CTATACT | 21215 | 0.0 | 14.690973 | 4 |
TACCGTG | 12225 | 0.0 | 14.625301 | 7 |
CTAGTAC | 14245 | 0.0 | 14.399869 | 3 |
TATACTG | 21440 | 0.0 | 14.382603 | 5 |
CCGTGAG | 11700 | 0.0 | 14.199743 | 9 |
ACCGTGA | 15090 | 0.0 | 13.466864 | 8 |
GTATAGA | 30095 | 0.0 | 13.424131 | 1 |
GTATAGG | 14740 | 0.0 | 13.162386 | 1 |
CTATACC | 23085 | 0.0 | 13.094276 | 4 |
TAGGCCG | 3695 | 0.0 | 12.575279 | 5 |
GAGCGCG | 2690 | 0.0 | 12.560559 | 7 |
GTACTAG | 18270 | 0.0 | 12.341978 | 1 |
CATACAC | 96770 | 0.0 | 12.33032 | 3 |
TAGTACT | 27655 | 0.0 | 12.050643 | 4 |
CCTAGTA | 17005 | 0.0 | 12.036332 | 2 |
GTGTATG | 95590 | 0.0 | 11.996026 | 1 |
CTAGGCT | 10305 | 0.0 | 11.888253 | 4 |