Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946290.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24891988 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATAGA | 15325 | 0.0 | 13.419761 | 1 |
TATACTG | 12000 | 0.0 | 13.314935 | 5 |
TCTATAC | 14085 | 0.0 | 13.04874 | 3 |
TATACCG | 7320 | 0.0 | 12.904058 | 5 |
TAGACCG | 5995 | 0.0 | 12.855708 | 5 |
CTAGTAC | 7580 | 0.0 | 12.836595 | 3 |
GTACTAG | 9495 | 0.0 | 12.787586 | 1 |
CATACAC | 68815 | 0.0 | 12.6709585 | 3 |
CTATACT | 12340 | 0.0 | 12.570352 | 4 |
ACATGAC | 56355 | 0.0 | 12.340584 | 8 |
GTGTATG | 65590 | 0.0 | 12.290896 | 1 |
GACCGTG | 4915 | 0.0 | 12.237628 | 7 |
TATACAG | 11225 | 0.0 | 12.099093 | 5 |
TACCGTG | 5880 | 0.0 | 12.067309 | 7 |
CATGACA | 57340 | 0.0 | 11.972866 | 9 |
TAGTACT | 15200 | 0.0 | 11.7823 | 4 |
ACACATG | 67850 | 0.0 | 11.780731 | 6 |
CCGTGAG | 6130 | 0.0 | 11.651684 | 9 |
TAGGACT | 8075 | 0.0 | 11.584018 | 4 |
ATACCGT | 6370 | 0.0 | 11.508082 | 6 |