Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946318.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24537618 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 9700 | 0.0 | 17.731785 | 5 |
CCGTGAG | 6520 | 0.0 | 16.216421 | 9 |
TACCGTG | 7755 | 0.0 | 16.118391 | 7 |
TCTATAC | 17200 | 0.0 | 15.248239 | 3 |
GAGCGCG | 1205 | 0.0 | 15.208958 | 7 |
TATACTG | 12885 | 0.0 | 14.77113 | 5 |
ACCGTGA | 8560 | 0.0 | 14.657481 | 8 |
ATACCGT | 9105 | 0.0 | 14.60596 | 6 |
CTATACT | 12595 | 0.0 | 13.695623 | 4 |
CTAGTAC | 8050 | 0.0 | 13.370681 | 3 |
CTATACC | 13680 | 0.0 | 13.296543 | 4 |
CATACAC | 60660 | 0.0 | 13.241999 | 3 |
GTATAGA | 18450 | 0.0 | 13.238275 | 1 |
ACATGAC | 50735 | 0.0 | 12.689215 | 8 |
GTATAGG | 8510 | 0.0 | 12.553265 | 1 |
ACACATG | 62775 | 0.0 | 12.501247 | 6 |
GCGCGCC | 1515 | 0.0 | 12.407019 | 9 |
GTGTATG | 57520 | 0.0 | 12.288856 | 1 |
CATGACA | 51685 | 0.0 | 12.219539 | 9 |
CACATGA | 61055 | 0.0 | 12.03753 | 7 |