Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946321.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22209738 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 10500 | 0.0 | 14.860419 | 5 |
TATACCG | 8135 | 0.0 | 14.154379 | 5 |
CTAGTAC | 8145 | 0.0 | 13.6757555 | 3 |
CTATACT | 10975 | 0.0 | 13.617736 | 4 |
GTATAGA | 15035 | 0.0 | 13.587907 | 1 |
TCTATAC | 13405 | 0.0 | 13.498576 | 3 |
GTACTAG | 10585 | 0.0 | 13.430195 | 1 |
CATACAC | 47800 | 0.0 | 13.34277 | 3 |
CCGTGAG | 6230 | 0.0 | 13.277212 | 9 |
TACCGTG | 5940 | 0.0 | 12.975966 | 7 |
GTCGCGC | 985 | 0.0 | 12.882786 | 8 |
GTGTATG | 45335 | 0.0 | 12.750611 | 1 |
TAGTACT | 14900 | 0.0 | 12.743168 | 4 |
ACATGAC | 35450 | 0.0 | 12.714072 | 8 |
GTACTAC | 8465 | 0.0 | 12.492168 | 6 |
ACACATG | 48040 | 0.0 | 12.444183 | 6 |
ATACCGT | 7025 | 0.0 | 12.309879 | 6 |
TATACAG | 9675 | 0.0 | 12.289999 | 5 |
ACCGTGA | 7750 | 0.0 | 12.249884 | 8 |
CTAGGCT | 6190 | 0.0 | 12.224118 | 4 |