Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946457.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24666616 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCGTGCG | 1310 | 0.0 | 14.71002 | 9 |
TATACCG | 8625 | 0.0 | 14.443691 | 5 |
CCGTGAG | 5630 | 0.0 | 13.440587 | 9 |
GTCGCGC | 645 | 1.4551915E-11 | 13.116632 | 8 |
TACCGTG | 5960 | 0.0 | 13.013071 | 7 |
GAGCGCG | 1290 | 0.0 | 12.753239 | 7 |
ATACCGT | 7345 | 0.0 | 12.607216 | 6 |
TATACTG | 12985 | 0.0 | 12.490177 | 5 |
GCCGTGC | 2480 | 0.0 | 12.318879 | 8 |
GTATAGA | 18200 | 0.0 | 12.24926 | 1 |
TCTATAC | 16975 | 0.0 | 11.963697 | 3 |
CTATACT | 13345 | 0.0 | 11.90665 | 4 |
CTAGTAC | 7715 | 0.0 | 11.699215 | 3 |
GTATTAG | 14885 | 0.0 | 11.406732 | 1 |
TAGGCTG | 7000 | 0.0 | 11.349588 | 5 |
TATACAG | 11560 | 0.0 | 11.345871 | 5 |
ACATGAC | 68555 | 0.0 | 11.2918215 | 8 |
ACCGTGA | 7050 | 0.0 | 11.26697 | 8 |
GTATATA | 38525 | 0.0 | 11.219557 | 1 |
CATACAC | 83815 | 0.0 | 11.105417 | 3 |