Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945685.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 61638336 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCCGTA | 6040 | 0.0 | 8.346645 | 56 |
GGTCGCC | 7410 | 0.0 | 7.274113 | 53 |
GCCGTAT | 7375 | 0.0 | 7.1684246 | 57 |
GCGTCGT | 10675 | 0.0 | 6.220878 | 21 |
CGTGTAG | 10215 | 0.0 | 6.1603937 | 25 |
CCGTATC | 8580 | 0.0 | 5.957695 | 58 |
TGGTCGC | 9865 | 0.0 | 5.925006 | 52 |
AATGCCG | 11330 | 0.0 | 5.8907795 | 13 |
GAGCGTC | 11315 | 0.0 | 5.868031 | 19 |
AGCGTCG | 11120 | 0.0 | 5.8142433 | 20 |
GTCGTGT | 12215 | 0.0 | 5.637246 | 23 |
CGTCGTG | 13245 | 0.0 | 5.330594 | 22 |
GAGACCG | 12710 | 0.0 | 5.0654902 | 40 |