Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945451.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 76576416 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 13405 | 0.0 | 7.743233 | 94-95 |
CGTATGC | 19110 | 0.0 | 6.748362 | 94-95 |
CATCACG | 46850 | 0.0 | 6.494034 | 94-95 |
TATGCCG | 14310 | 0.0 | 6.334351 | 94-95 |
TGGTCGC | 18235 | 0.0 | 6.209718 | 94-95 |
CTCGGTG | 32335 | 0.0 | 6.110654 | 94-95 |
GTATGCC | 18475 | 0.0 | 5.927845 | 94-95 |
GATCTCG | 69680 | 0.0 | 5.925726 | 94-95 |
TGCCGTC | 11780 | 0.0 | 5.60724 | 94-95 |
TCGGTGG | 31315 | 0.0 | 5.323517 | 94-95 |
ATCTCGG | 48420 | 0.0 | 5.2322855 | 94-95 |
CGCCGTA | 11990 | 0.0 | 5.199 | 94-95 |
ATGCCGT | 13445 | 0.0 | 5.1893325 | 94-95 |
CAGTCAC | 71320 | 0.0 | 5.155991 | 94-95 |
ATCACGA | 54460 | 0.0 | 5.0510297 | 94-95 |
GTCGCCG | 20115 | 0.0 | 5.0180755 | 94-95 |