Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945597.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 46734894 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 23835 | 0.0 | 17.145266 | 5 |
TATACCG | 15800 | 0.0 | 16.250328 | 5 |
CATACAC | 150070 | 0.0 | 15.2577715 | 3 |
TCTATAC | 30500 | 0.0 | 15.044031 | 3 |
TACCGTG | 12090 | 0.0 | 14.788091 | 7 |
CTATACT | 26070 | 0.0 | 14.712852 | 4 |
ACATGAC | 112830 | 0.0 | 14.709974 | 8 |
ACACATG | 148480 | 0.0 | 14.440409 | 6 |
GTGTATG | 133155 | 0.0 | 14.306246 | 1 |
CATGACA | 117525 | 0.0 | 14.068887 | 9 |
CTAGTAC | 14280 | 0.0 | 13.994931 | 3 |
CACATGA | 143070 | 0.0 | 13.965432 | 7 |
TAGGCTG | 12950 | 0.0 | 13.944401 | 5 |
TCATACA | 161395 | 0.0 | 13.909543 | 2 |
ATACCGT | 13610 | 0.0 | 13.893761 | 6 |
ATCATAC | 155180 | 0.0 | 13.702809 | 1 |
CCGTGAG | 10410 | 0.0 | 13.601913 | 9 |
GTATAGA | 32220 | 0.0 | 13.510296 | 1 |
TATACAG | 23925 | 0.0 | 13.484819 | 5 |
GTCGCGC | 2265 | 0.0 | 13.4526 | 8 |