Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945445.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37191472 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 12155 | 0.0 | 14.831213 | 5 |
CATACAC | 101445 | 0.0 | 14.634163 | 3 |
TATACTG | 18935 | 0.0 | 14.51961 | 5 |
GAGCGCG | 2085 | 0.0 | 14.372363 | 7 |
CTATACT | 19995 | 0.0 | 13.9599 | 4 |
ACACATG | 101240 | 0.0 | 13.921048 | 6 |
ACATGAC | 80945 | 0.0 | 13.827524 | 8 |
TCTATAC | 24030 | 0.0 | 13.43636 | 3 |
CATGACA | 82860 | 0.0 | 13.335372 | 9 |
CACATGA | 95860 | 0.0 | 13.283258 | 7 |
TCATACA | 111490 | 0.0 | 13.147374 | 2 |
TATGAGC | 14765 | 0.0 | 13.0681925 | 94 |
TACCGTG | 8730 | 0.0 | 13.021989 | 7 |
GTGTATG | 91480 | 0.0 | 12.960747 | 1 |
ATCATAC | 108975 | 0.0 | 12.860172 | 1 |
TACACAT | 120770 | 0.0 | 12.737182 | 5 |
TATACAG | 18190 | 0.0 | 12.6824 | 5 |
TAGGCTG | 10630 | 0.0 | 12.618516 | 5 |
GTATATA | 55015 | 0.0 | 12.586005 | 1 |
ATACCGT | 10715 | 0.0 | 12.429632 | 6 |