Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945520.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 88686066 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 23190 | 0.0 | 7.1301446 | 94-95 |
TGGTCGC | 28540 | 0.0 | 6.361733 | 94-95 |
TATGCCG | 21315 | 0.0 | 5.7868385 | 94-95 |
CGTATGC | 27340 | 0.0 | 5.6394687 | 94-95 |
CGCCGTA | 20310 | 0.0 | 5.5509405 | 92-93 |
GTATGCC | 25455 | 0.0 | 5.5244784 | 94-95 |
TGCCGTC | 17215 | 0.0 | 5.4818864 | 94-95 |
GCCGTCT | 17950 | 0.0 | 5.272229 | 94-95 |
CTCGGTG | 48005 | 0.0 | 5.244115 | 94-95 |