Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945519.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31848056 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 11565 | 0.0 | 14.304389 | 5 |
ATACCGT | 10245 | 0.0 | 13.440888 | 6 |
CCGTGAG | 8640 | 0.0 | 13.218076 | 9 |
TACCGTG | 8930 | 0.0 | 12.630855 | 7 |
ACCGTGA | 10965 | 0.0 | 12.429788 | 8 |
TATACTG | 16005 | 0.0 | 11.892457 | 5 |
CTAGTAC | 11055 | 0.0 | 11.478959 | 3 |
CTATACT | 16955 | 0.0 | 11.475584 | 4 |
TCTATAC | 21055 | 0.0 | 11.339816 | 3 |
GTATAGG | 11825 | 0.0 | 11.334591 | 1 |
CATACAC | 88950 | 0.0 | 11.001002 | 3 |
ACACATG | 88190 | 0.0 | 10.652848 | 6 |
GTATTAG | 19230 | 0.0 | 10.638298 | 1 |
ACATGAC | 72600 | 0.0 | 10.5906105 | 8 |
GTGTATG | 83360 | 0.0 | 10.5780525 | 1 |
TAGACCG | 7755 | 0.0 | 10.544834 | 5 |
GTATAGA | 22330 | 0.0 | 10.36188 | 1 |
CATGACA | 73205 | 0.0 | 10.342618 | 9 |
TATACAG | 14285 | 0.0 | 10.16601 | 5 |
CTATACC | 16755 | 0.0 | 10.125933 | 4 |