Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946113.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 37158288 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTATACT | 18220 | 0.0 | 12.15189 | 4 |
TATACTG | 16845 | 0.0 | 11.858177 | 5 |
TAGGCTG | 12585 | 0.0 | 11.801409 | 5 |
CTAGGCT | 10430 | 0.0 | 11.357625 | 4 |
TATACCG | 12225 | 0.0 | 11.34157 | 5 |
TCTATAC | 21575 | 0.0 | 11.220992 | 3 |
GTCGCGC | 3395 | 0.0 | 11.074494 | 8 |
TATACAG | 15040 | 0.0 | 10.625052 | 5 |
CATACAC | 95240 | 0.0 | 10.157826 | 3 |
CTGTCCC | 13535 | 0.0 | 10.138965 | 9 |
GTATTAG | 21170 | 0.0 | 10.060563 | 1 |
GCTGTCC | 11845 | 0.0 | 9.919246 | 8 |
ACATGAC | 80265 | 0.0 | 9.901274 | 8 |
GTATAGA | 22705 | 0.0 | 9.815259 | 1 |
TAGTACT | 20985 | 0.0 | 9.766722 | 4 |
ACACATG | 96750 | 0.0 | 9.744433 | 6 |
GTGTATG | 93465 | 0.0 | 9.63307 | 1 |
CATGACA | 82550 | 0.0 | 9.604329 | 9 |
GTATAGG | 14310 | 0.0 | 9.560889 | 1 |
ACAGTGC | 7340 | 0.0 | 9.476312 | 8 |