Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946124.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29725294 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 14730 | 0.0 | 13.148151 | 5 |
TATACCG | 8865 | 0.0 | 12.620263 | 5 |
GTATAGA | 19305 | 0.0 | 11.766554 | 1 |
CATACAC | 87085 | 0.0 | 11.655003 | 3 |
CTATACT | 15330 | 0.0 | 11.622517 | 4 |
TCTATAC | 17890 | 0.0 | 11.536055 | 3 |
ACACATG | 86305 | 0.0 | 11.409936 | 6 |
ACATGAC | 72410 | 0.0 | 11.352762 | 8 |
TATACAG | 14300 | 0.0 | 10.979451 | 5 |
CACATGA | 84965 | 0.0 | 10.903695 | 7 |
GTATTAG | 16430 | 0.0 | 10.877221 | 1 |
GTATATA | 41635 | 0.0 | 10.843877 | 1 |
CATGACA | 75325 | 0.0 | 10.775278 | 9 |
GTGTATG | 84280 | 0.0 | 10.568841 | 1 |
TAGACTG | 7130 | 0.0 | 10.548742 | 5 |
TCATACA | 96080 | 0.0 | 10.490504 | 2 |
GTATAGG | 10395 | 0.0 | 10.451037 | 1 |
ATCATAC | 95180 | 0.0 | 10.218256 | 1 |
GATTGAG | 80895 | 0.0 | 9.77308 | 7 |
TTGAGTA | 82205 | 0.0 | 9.701945 | 9 |