Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945957.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23610888 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 7730 | 0.0 | 16.601147 | 5 |
GAGCGCG | 1265 | 0.0 | 15.976319 | 7 |
CTATACT | 12835 | 0.0 | 15.421536 | 4 |
TATACTG | 12515 | 0.0 | 15.361988 | 5 |
TCTATAC | 15400 | 0.0 | 14.776783 | 3 |
CTAGTAC | 8070 | 0.0 | 14.157546 | 3 |
CATACAC | 53645 | 0.0 | 13.8741665 | 3 |
TACCGTG | 5885 | 0.0 | 13.497056 | 7 |
GTATAGA | 17345 | 0.0 | 13.080526 | 1 |
GTATAGG | 8750 | 0.0 | 13.07226 | 1 |
ACACATG | 54440 | 0.0 | 13.06299 | 6 |
ACATGAC | 45265 | 0.0 | 13.061886 | 8 |
ATACCGT | 7090 | 0.0 | 13.059958 | 6 |
GTGTATG | 52350 | 0.0 | 12.830977 | 1 |
TATACAG | 10930 | 0.0 | 12.77295 | 5 |
GTATATA | 36045 | 0.0 | 12.745511 | 1 |
GTATTAG | 15155 | 0.0 | 12.672336 | 1 |
TAGTACT | 14095 | 0.0 | 12.608638 | 4 |
GGACCGT | 2610 | 0.0 | 12.60606 | 6 |
CATGACA | 45955 | 0.0 | 12.599593 | 9 |