Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946032.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 40193294 |
Sequences flagged as poor quality | 0 |
Sequence length | 99 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 19795 | 0.0 | 14.846083 | 5 |
GACCGTG | 6040 | 0.0 | 14.627396 | 7 |
TAGACCG | 9545 | 0.0 | 13.738 | 5 |
CATACAC | 116665 | 0.0 | 13.113109 | 3 |
CTAGTAC | 12870 | 0.0 | 13.043045 | 3 |
CTATACT | 20790 | 0.0 | 12.905406 | 4 |
TATACCG | 11805 | 0.0 | 12.841092 | 5 |
ACATGAC | 81555 | 0.0 | 12.783075 | 8 |
ACACATG | 110860 | 0.0 | 12.709196 | 6 |
GTACTAG | 15820 | 0.0 | 12.644541 | 1 |
TCTATAC | 24880 | 0.0 | 12.428582 | 3 |
AGACCGT | 8875 | 0.0 | 12.364995 | 6 |
TACCGTG | 8520 | 0.0 | 12.170701 | 7 |
CATGACA | 84605 | 0.0 | 12.129838 | 9 |
CACATGA | 110015 | 0.0 | 12.029105 | 7 |
ACCGTGA | 12555 | 0.0 | 11.888817 | 8 |
GTACTAC | 13960 | 0.0 | 11.824785 | 6 |
GTATAGA | 25700 | 0.0 | 11.8201 | 1 |
TCATACA | 127920 | 0.0 | 11.716397 | 2 |
TAGTACT | 24570 | 0.0 | 11.6959 | 4 |