Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946169.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 35265322 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGAGC | 14900 | 0.0 | 11.892247 | 94 |
GTCGCGC | 1630 | 0.0 | 11.811606 | 8 |
TATACCG | 11480 | 0.0 | 11.616821 | 5 |
TATACTG | 16950 | 0.0 | 11.607942 | 5 |
GAGCGCG | 2445 | 0.0 | 11.523502 | 7 |
CTATACT | 18175 | 0.0 | 10.677521 | 4 |
TCTATAC | 22215 | 0.0 | 10.637901 | 3 |
GTATAGA | 23275 | 0.0 | 10.415137 | 1 |
TAGACCG | 8285 | 0.0 | 10.258809 | 5 |
CATACAC | 99310 | 0.0 | 10.2281475 | 3 |
ACACATG | 96990 | 0.0 | 9.910669 | 6 |
GTGTATG | 94175 | 0.0 | 9.8814 | 1 |
TATACAG | 15750 | 0.0 | 9.838848 | 5 |
GCGCGCC | 3165 | 0.0 | 9.7923155 | 9 |
ACATGAC | 77960 | 0.0 | 9.769936 | 8 |
GACCGTG | 5515 | 0.0 | 9.621549 | 7 |
CTAGTAC | 11745 | 0.0 | 9.600471 | 3 |
GTATATA | 48815 | 0.0 | 9.584744 | 1 |
GTATTAG | 20200 | 0.0 | 9.50728 | 1 |
ATACCGT | 10260 | 0.0 | 9.474037 | 6 |