Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945959.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 81687784 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGGAAG | 41125 | 0.0 | 6.904477 | 4 |
GGTCGCC | 10230 | 0.0 | 6.4861207 | 44-45 |
AGAGCGT | 23095 | 0.0 | 6.056792 | 9 |
GATCGGA | 55135 | 0.0 | 5.573414 | 2 |
CGGAAGA | 56205 | 0.0 | 5.4004273 | 5 |
GAGCGTC | 13835 | 0.0 | 5.325061 | 10-11 |
GCACACG | 14480 | 0.0 | 5.313316 | 12-13 |
CGCCGTA | 12430 | 0.0 | 5.1173844 | 46-47 |
TATGCCG | 12450 | 0.0 | 5.0582376 | 48-49 |
ATCGGAA | 61640 | 0.0 | 5.015023 | 3 |
TGGTCGC | 13225 | 0.0 | 5.0108404 | 42-43 |