Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946017.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 87303692 |
Sequences flagged as poor quality | 0 |
Sequence length | 40-101 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTCGCC | 9560 | 0.0 | 6.547269 | 44-45 |
TCGGAAG | 42700 | 0.0 | 6.3807116 | 4 |
AGAGCGT | 24115 | 0.0 | 5.7540755 | 9 |
TGCCGTC | 11975 | 0.0 | 5.4386907 | 50-51 |
GCCGTCT | 12735 | 0.0 | 5.1948376 | 52-53 |
CGCCGTA | 11240 | 0.0 | 5.133878 | 46-47 |
TATGCCG | 11770 | 0.0 | 5.058232 | 48-49 |
GATCGGA | 56825 | 0.0 | 5.034894 | 2 |