Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945777.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 58644130 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCGTCT | 53545 | 0.0 | 8.558173 | 94-95 |
CGCCGTA | 65845 | 0.0 | 8.398261 | 94-95 |
TGCCGTC | 57320 | 0.0 | 8.375633 | 94-95 |
CGTATGC | 87170 | 0.0 | 8.176856 | 94-95 |
TATGCCG | 69920 | 0.0 | 8.173676 | 94-95 |
GCCGTAT | 63410 | 0.0 | 8.095443 | 94-95 |
ATGCCGT | 63860 | 0.0 | 8.075577 | 94-95 |
GTATGCC | 80335 | 0.0 | 8.071599 | 94-95 |
GTCGCCG | 88020 | 0.0 | 8.06822 | 94-95 |
CCGTATC | 58465 | 0.0 | 8.05728 | 94-95 |
GGTCGCC | 90430 | 0.0 | 7.9660997 | 94-95 |
TCGCCGT | 81500 | 0.0 | 7.565838 | 94-95 |
CGTATCA | 57390 | 0.0 | 7.5131545 | 94-95 |
CCGTCTT | 59455 | 0.0 | 7.1563616 | 94-95 |
TCGTATG | 101735 | 0.0 | 7.1485715 | 94-95 |
TGGTCGC | 96530 | 0.0 | 7.124018 | 92-93 |
CTTCTGC | 59725 | 0.0 | 6.698637 | 94-95 |
CTCGTAT | 104330 | 0.0 | 6.5845785 | 92-93 |
GTGGTCG | 110510 | 0.0 | 6.4462695 | 92-93 |
CGTCTTC | 67505 | 0.0 | 6.173479 | 92-93 |