Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946191.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 38466094 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 13765 | 0.0 | 14.5471735 | 5 |
TACCGTG | 10095 | 0.0 | 13.265848 | 7 |
TCTATAC | 23860 | 0.0 | 12.726452 | 3 |
ATACCGT | 12055 | 0.0 | 12.70683 | 6 |
CCGTGAG | 10180 | 0.0 | 12.462076 | 9 |
TATACTG | 17790 | 0.0 | 12.286333 | 5 |
CTAGGCT | 9510 | 0.0 | 11.417412 | 4 |
ACCGTGA | 13380 | 0.0 | 11.202317 | 8 |
CTAGTAC | 12040 | 0.0 | 11.087589 | 3 |
TAGGCTG | 11085 | 0.0 | 10.940301 | 5 |
GTACTAG | 16600 | 0.0 | 10.738247 | 1 |
TATGAGC | 17355 | 0.0 | 10.718232 | 94 |
CTATACC | 19365 | 0.0 | 10.704276 | 4 |
GTCGCGC | 1895 | 0.0 | 10.661849 | 8 |
CTATACT | 19795 | 0.0 | 10.6142235 | 4 |
CATACAC | 97945 | 0.0 | 10.390128 | 3 |
GTATAGA | 25185 | 0.0 | 10.364617 | 1 |
TATACAG | 17285 | 0.0 | 10.279398 | 5 |
ACACATG | 97700 | 0.0 | 9.897777 | 6 |
GTATAGG | 12925 | 0.0 | 9.825066 | 1 |