Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946104.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 53691510 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGCATT | 7320 | 0.0 | 7.690696 | 1 |
AATGCCG | 9635 | 0.0 | 6.1323986 | 13 |
CGAGATC | 17135 | 0.0 | 5.9177113 | 18 |
GAGACCG | 10455 | 0.0 | 5.658681 | 50 |
GAGCGGT | 10355 | 0.0 | 5.6413407 | 29 |
GAGATCG | 19070 | 0.0 | 5.4456396 | 19 |
AGAGCGG | 12400 | 0.0 | 5.3877697 | 28 |
TCGGAAG | 18905 | 0.0 | 5.3456473 | 23 |
CGAGACC | 11305 | 0.0 | 5.202202 | 49 |
GCGGTTC | 11725 | 0.0 | 5.043043 | 31 |
GAGCGTC | 7605 | 0.0 | 5.0135255 | 29 |
AGCGTCG | 8035 | 0.0 | 5.006903 | 30 |