Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946118.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 33590670 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 11975 | 0.0 | 14.011814 | 5 |
GTCGCGC | 1845 | 0.0 | 12.481621 | 8 |
TATACTG | 15925 | 0.0 | 12.100576 | 5 |
GTATAGA | 22385 | 0.0 | 12.098314 | 1 |
CCGTGAG | 8335 | 0.0 | 11.897098 | 9 |
CTAGTAC | 11415 | 0.0 | 11.242546 | 3 |
TACCGTG | 9755 | 0.0 | 11.225384 | 7 |
TCTATAC | 20675 | 0.0 | 11.209322 | 3 |
CTATACT | 16895 | 0.0 | 11.15738 | 4 |
ACATGAC | 81090 | 0.0 | 11.156673 | 8 |
ATACCGT | 10675 | 0.0 | 11.050493 | 6 |
CATACAC | 101025 | 0.0 | 10.95822 | 3 |
GTATATA | 47950 | 0.0 | 10.84491 | 1 |
TAGGCTG | 10605 | 0.0 | 10.813863 | 5 |
ACACATG | 104195 | 0.0 | 10.626842 | 6 |
CATGACA | 83575 | 0.0 | 10.605459 | 9 |
CACATGA | 100325 | 0.0 | 10.43707 | 7 |
GTATAGG | 12475 | 0.0 | 10.326888 | 1 |
ACCGTGA | 11105 | 0.0 | 10.241607 | 8 |
TAGTACT | 20315 | 0.0 | 10.227781 | 4 |