Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945784.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 44074778 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 7140 | 0.0 | 7.1457047 | 48-49 |
TCGGAAG | 18895 | 0.0 | 6.458724 | 3 |
TATGCCG | 8625 | 0.0 | 6.4151564 | 46-47 |
ATGCCGT | 8280 | 0.0 | 5.9592447 | 46-47 |
GCCGTCT | 8010 | 0.0 | 5.9210176 | 48-49 |
GAGCACA | 19150 | 0.0 | 5.8359704 | 9 |
AGTCACG | 9450 | 0.0 | 5.785653 | 28-29 |
AGAGCAC | 20410 | 0.0 | 5.521029 | 8 |
CGTATGC | 10375 | 0.0 | 5.447638 | 44-45 |
GTATGCC | 9595 | 0.0 | 5.2914567 | 44-45 |
GCACACG | 9765 | 0.0 | 5.263897 | 10-11 |