Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945860.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 72945366 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCGTC | 55240 | 0.0 | 9.418563 | 94-95 |
TATGCCG | 68215 | 0.0 | 9.381555 | 94-95 |
CGCCGTA | 58925 | 0.0 | 9.317173 | 94-95 |
ATGCCGT | 62080 | 0.0 | 9.279723 | 94-95 |
GCCGTCT | 50445 | 0.0 | 9.259385 | 94-95 |
GTATGCC | 78555 | 0.0 | 9.129123 | 94-95 |
GCCGTAT | 57125 | 0.0 | 9.099458 | 94-95 |
CGTATGC | 86895 | 0.0 | 9.064558 | 94-95 |
GGTCGCC | 83990 | 0.0 | 8.846549 | 94-95 |
CCGTATC | 53325 | 0.0 | 8.300629 | 94-95 |
GTCGCCG | 85150 | 0.0 | 8.2463665 | 94-95 |
TGGTCGC | 92130 | 0.0 | 7.9927573 | 94-95 |
TCGTATG | 102955 | 0.0 | 7.9181237 | 94-95 |
CGTATCA | 52375 | 0.0 | 7.884451 | 94-95 |
TCGCCGT | 79130 | 0.0 | 7.4903026 | 94-95 |
CCGTCTT | 58785 | 0.0 | 7.1903396 | 94-95 |
CTCGTAT | 106670 | 0.0 | 7.148841 | 92-93 |
GTGGTCG | 109965 | 0.0 | 6.76834 | 92-93 |
GGTGGTC | 117355 | 0.0 | 6.3360577 | 92-93 |
TCGGTGG | 138605 | 0.0 | 6.3166986 | 94-95 |