Basic Statistics
Measure | Value |
---|---|
Filename | SRR1945839.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 42562706 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTGTAG | 40365 | 0.0 | 5.638145 | 94-95 |
ACGTCTG | 40550 | 0.0 | 5.501111 | 94-95 |
GCACACG | 48420 | 0.0 | 5.4802966 | 94-95 |
GTCGTGT | 47465 | 0.0 | 5.275247 | 94-95 |
AGCGTCG | 52225 | 0.0 | 5.2402225 | 94-95 |
CGTCGTG | 49320 | 0.0 | 5.235789 | 94-95 |
GCGTCGT | 49185 | 0.0 | 5.2163506 | 94-95 |
GAGCGTC | 55880 | 0.0 | 5.1865563 | 94-95 |
GTAGGGA | 39395 | 0.0 | 5.071431 | 94-95 |
ACACGTC | 47280 | 0.0 | 5.049685 | 94-95 |
CACGTCT | 45955 | 0.0 | 5.029858 | 94-95 |
TCGTGTA | 47400 | 0.0 | 5.026877 | 94-95 |
CACACGT | 49720 | 0.0 | 5.0216594 | 94-95 |
CGTCTGA | 41670 | 0.0 | 5.0111923 | 94-95 |