Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946155.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34356878 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 12105 | 0.0 | 13.783198 | 5 |
TACCGTG | 9330 | 0.0 | 12.593379 | 7 |
TATACTG | 16070 | 0.0 | 12.341928 | 5 |
CTAGTAC | 11580 | 0.0 | 12.135259 | 3 |
ATACCGT | 10445 | 0.0 | 11.74405 | 6 |
GTATAGA | 23885 | 0.0 | 11.615036 | 1 |
TCTATAC | 21570 | 0.0 | 11.61351 | 3 |
CTATACT | 18095 | 0.0 | 11.610085 | 4 |
CATACAC | 98805 | 0.0 | 11.335262 | 3 |
TAGTACT | 22065 | 0.0 | 11.076074 | 4 |
TAGGCTG | 10240 | 0.0 | 11.015335 | 5 |
ACCGTGA | 11035 | 0.0 | 10.988304 | 8 |
CCGTGAG | 7470 | 0.0 | 10.947424 | 9 |
ACATGAC | 78465 | 0.0 | 10.787505 | 8 |
CTAGGCT | 9740 | 0.0 | 10.760497 | 4 |
ACACATG | 98165 | 0.0 | 10.695776 | 6 |
GCCGTGC | 3390 | 0.0 | 10.6751585 | 8 |
GTCGCGC | 1770 | 0.0 | 10.621112 | 8 |
CATGACA | 80920 | 0.0 | 10.442803 | 9 |
TATACAG | 15985 | 0.0 | 10.408235 | 5 |