Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946030.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36549610 |
Sequences flagged as poor quality | 0 |
Sequence length | 99 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACCGTG | 9450 | 0.0 | 15.893498 | 7 |
TATACCG | 12390 | 0.0 | 15.612441 | 5 |
GTCGCGC | 1410 | 0.0 | 14.510499 | 8 |
TATACTG | 18115 | 0.0 | 14.477367 | 5 |
CCGTGAG | 8530 | 0.0 | 14.391402 | 9 |
ATACCGT | 10895 | 0.0 | 13.9135895 | 6 |
TCTATAC | 23820 | 0.0 | 13.606294 | 3 |
ACCGTGA | 11005 | 0.0 | 13.520997 | 8 |
CTAGTAC | 12165 | 0.0 | 13.30197 | 3 |
CATACAC | 113705 | 0.0 | 13.08637 | 3 |
CTATACT | 18125 | 0.0 | 12.9044285 | 4 |
ACACATG | 109360 | 0.0 | 12.696385 | 6 |
ACATGAC | 92030 | 0.0 | 12.687209 | 8 |
GTATAGA | 24635 | 0.0 | 12.595563 | 1 |
GTGTATG | 106480 | 0.0 | 12.30731 | 1 |
CATGACA | 95775 | 0.0 | 12.030879 | 9 |
GTATATA | 52010 | 0.0 | 12.021448 | 1 |
CACATGA | 107395 | 0.0 | 11.984801 | 7 |
TAGACCG | 7895 | 0.0 | 11.956187 | 5 |
GATTGAG | 101645 | 0.0 | 11.87135 | 7 |