Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946263.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 32622332 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGACCGC | 11085 | 0.0 | 16.242014 | 94 |
TATACCG | 10785 | 0.0 | 15.906681 | 5 |
ATACCGT | 9195 | 0.0 | 14.258355 | 6 |
CTAGTAC | 13085 | 0.0 | 13.722159 | 3 |
TATACTG | 14190 | 0.0 | 13.514022 | 5 |
GTATAGA | 21220 | 0.0 | 13.368987 | 1 |
GTACTAG | 16880 | 0.0 | 13.12729 | 1 |
CCGTGAG | 10475 | 0.0 | 12.873981 | 9 |
TACCGTG | 8760 | 0.0 | 12.8204155 | 7 |
TCTATAC | 18800 | 0.0 | 12.80103 | 3 |
TATACAG | 13585 | 0.0 | 11.970804 | 5 |
CTATACT | 14520 | 0.0 | 11.718575 | 4 |
ACCGTGA | 12575 | 0.0 | 11.696197 | 8 |
CATACAC | 91035 | 0.0 | 11.648327 | 3 |
GTGTATG | 88440 | 0.0 | 11.543502 | 1 |
TACTAGG | 17995 | 0.0 | 11.424262 | 2 |
CCTAGTA | 14280 | 0.0 | 11.398468 | 2 |
ACATGAC | 76260 | 0.0 | 11.300842 | 8 |
TAGTACT | 25975 | 0.0 | 11.291765 | 4 |
GTATTAG | 16325 | 0.0 | 11.18163 | 1 |