FastQCFastQC Report
Tue 15 Nov 2016
SRR1946067.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1946067.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85750536
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATGCCG132750.06.064910424
GAGCGGT147700.05.80563839
TGCCGAG163550.05.18089526
AGAGCGG176550.05.0353768