Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946260.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21089446 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 6595 | 0.0 | 12.402054 | 5 |
CTAGTAC | 7505 | 0.0 | 12.150949 | 3 |
TACCGTG | 5140 | 0.0 | 11.885285 | 7 |
GTACTAG | 9560 | 0.0 | 11.807017 | 1 |
CCGTGAG | 6235 | 0.0 | 11.606997 | 9 |
TATACTG | 10550 | 0.0 | 11.540017 | 5 |
TAGGCCG | 2115 | 0.0 | 10.890426 | 5 |
CCTAGTA | 8470 | 0.0 | 10.715624 | 2 |
GTATTAG | 12300 | 0.0 | 10.706309 | 1 |
TAGTACT | 14725 | 0.0 | 10.534594 | 4 |
TCTATAC | 13650 | 0.0 | 10.503314 | 3 |
GACCGTG | 3775 | 0.0 | 10.45663 | 7 |
ATACCGT | 6140 | 0.0 | 10.409523 | 6 |
CTATACT | 11200 | 0.0 | 10.408612 | 4 |
TACTAGG | 10670 | 0.0 | 10.401384 | 2 |
ACCGTGA | 7280 | 0.0 | 10.263638 | 8 |
GTATAGA | 14745 | 0.0 | 10.206859 | 1 |
TATACAG | 10110 | 0.0 | 10.04296 | 5 |
GTACTAC | 8435 | 0.0 | 10.02877 | 6 |
CCTATAC | 7035 | 0.0 | 9.955918 | 3 |