Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946183.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36635858 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 12030 | 0.0 | 12.609197 | 5 |
TACCGTG | 10200 | 0.0 | 12.017167 | 7 |
CTATACT | 18025 | 0.0 | 11.336952 | 4 |
TCTATAC | 22465 | 0.0 | 11.250039 | 3 |
ATACCGT | 10945 | 0.0 | 11.199112 | 6 |
TATACTG | 17460 | 0.0 | 10.974037 | 5 |
CCGTGAG | 8655 | 0.0 | 10.743967 | 9 |
TATGAGC | 15475 | 0.0 | 10.661443 | 94 |
GTATAGA | 24330 | 0.0 | 10.638063 | 1 |
CATACAC | 108815 | 0.0 | 10.490487 | 3 |
ACATGAC | 80435 | 0.0 | 10.410473 | 8 |
GTACTAG | 13275 | 0.0 | 10.351191 | 1 |
ACACATG | 105510 | 0.0 | 10.255284 | 6 |
CTAGGCT | 9125 | 0.0 | 10.193296 | 4 |
TATACAG | 15200 | 0.0 | 10.133997 | 5 |
TAGGCTG | 11385 | 0.0 | 10.106099 | 5 |
CATGACA | 82505 | 0.0 | 10.08672 | 9 |
CACATGA | 102300 | 0.0 | 9.920669 | 7 |
GTATATA | 47110 | 0.0 | 9.789375 | 1 |
CTAGTAC | 11315 | 0.0 | 9.756443 | 3 |