Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946110.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 35712628 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 17180 | 0.0 | 13.228963 | 5 |
TATACCG | 11125 | 0.0 | 12.620448 | 5 |
CTATACT | 18010 | 0.0 | 12.235638 | 4 |
CTAGTAC | 11810 | 0.0 | 11.933843 | 3 |
GTACTAG | 14205 | 0.0 | 11.763361 | 1 |
TCTATAC | 20970 | 0.0 | 11.470451 | 3 |
GTATAGA | 22560 | 0.0 | 11.37108 | 1 |
TATGAGC | 15465 | 0.0 | 11.305431 | 94 |
CATACAC | 91565 | 0.0 | 11.149084 | 3 |
TAGGCTG | 11360 | 0.0 | 11.119303 | 5 |
ACATGAC | 72420 | 0.0 | 11.048897 | 8 |
TAGTACT | 21225 | 0.0 | 11.024253 | 4 |
CTAGGCT | 9635 | 0.0 | 11.021081 | 4 |
GTATATA | 48055 | 0.0 | 10.970432 | 1 |
TATACAG | 16165 | 0.0 | 10.95139 | 5 |
ACACATG | 89750 | 0.0 | 10.825089 | 6 |
TACCGTG | 9125 | 0.0 | 10.652332 | 7 |
CATGACA | 74535 | 0.0 | 10.590516 | 9 |
GTGTATG | 86615 | 0.0 | 10.515554 | 1 |
GTATAGG | 12260 | 0.0 | 10.481333 | 1 |