Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946509.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25836078 |
Sequences flagged as poor quality | 0 |
Sequence length | 36-42 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTGTAG | 1820 | 7.401759E-7 | 6.5613976 | 35 |
TGCCGAG | 1570 | 0.0 | 5.8510447 | 15 |
GTGTAGG | 3285 | 5.379854E-6 | 5.5340815 | 36 |
GCGTCGT | 1345 | 8.021016E-8 | 5.4456058 | 31 |
TCGGAAG | 3330 | 0.0 | 5.4187193 | 23 |
CCGAGAT | 3320 | 0.0 | 5.194043 | 17 |
CCTGCTG | 2115 | 0.0 | 5.17969 | 8 |
CGGCATT | 2160 | 0.0 | 5.073439 | 1 |
AATGCCG | 1900 | 0.0 | 5.0030293 | 13 |