Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946516.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 27288162 |
Sequences flagged as poor quality | 0 |
Sequence length | 36-42 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTGCGG | 1630 | 0.006357833 | 7.838389 | 36 |
GCGGTTT | 29170 | 0.0 | 7.397726 | 32 |
TTTAAGT | 34950 | 0.0 | 6.458354 | 36 |
TGCGGTT | 31135 | 0.0 | 5.9448986 | 31 |
GTTTAAG | 33470 | 0.0 | 5.5251884 | 35 |
ACACTAC | 23455 | 0.0 | 5.2469583 | 4 |
CTACTTA | 24065 | 0.0 | 5.179309 | 7 |
CACTACT | 23565 | 0.0 | 5.142428 | 5 |
TACTTAG | 23380 | 0.0 | 5.042 | 8 |