Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946476.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28190848 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 10250 | 0.0 | 13.021287 | 5 |
TATACTG | 13695 | 0.0 | 12.1822 | 5 |
GTACTAG | 14550 | 0.0 | 11.672973 | 1 |
CTAGTAC | 11820 | 0.0 | 11.570044 | 3 |
TCTATAC | 17710 | 0.0 | 11.171797 | 3 |
CATACAC | 80525 | 0.0 | 11.129596 | 3 |
TACCGTG | 8415 | 0.0 | 10.666948 | 7 |
GTATTAG | 16055 | 0.0 | 10.666657 | 1 |
ACATGAC | 63920 | 0.0 | 10.653602 | 8 |
CTATACT | 14005 | 0.0 | 10.536734 | 4 |
CCGTGAG | 9600 | 0.0 | 10.525484 | 9 |
GTATAGA | 18275 | 0.0 | 10.426413 | 1 |
ACACATG | 80195 | 0.0 | 10.407708 | 6 |
CATGACA | 65220 | 0.0 | 10.304576 | 9 |
GTATATA | 45120 | 0.0 | 10.20824 | 1 |
GTGTATG | 76905 | 0.0 | 10.204196 | 1 |
CACATGA | 76000 | 0.0 | 10.1968975 | 7 |
GTACTAC | 12890 | 0.0 | 10.135644 | 6 |
TCATACA | 87945 | 0.0 | 10.083723 | 2 |
GTATAGG | 9740 | 0.0 | 10.047122 | 1 |