Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946506.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 70806874 |
Sequences flagged as poor quality | 0 |
Sequence length | 33-64 |
%GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGCATT | 8185 | 0.0 | 8.254263 | 1 |
AATGCCG | 7900 | 0.0 | 5.8003516 | 13 |
GCATTCC | 12780 | 0.0 | 5.5684857 | 3 |
GGCATTC | 13365 | 0.0 | 5.4680815 | 2 |
GGGGGGG | 118730 | 0.0 | 5.3632383 | 58 |
GCTGAAC | 12805 | 0.0 | 5.1260386 | 11 |
CCTGCTG | 13380 | 0.0 | 5.0484214 | 8 |
ATTCCTG | 13555 | 0.0 | 5.014617 | 5 |