Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946471.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28882400 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 15070 | 0.0 | 12.224938 | 5 |
GTATAGA | 20740 | 0.0 | 11.977542 | 1 |
GTACTAG | 13620 | 0.0 | 11.779308 | 1 |
CCGTGCG | 1585 | 0.0 | 11.56423 | 9 |
TATACCG | 9360 | 0.0 | 11.448086 | 5 |
TCTATAC | 19095 | 0.0 | 11.370935 | 3 |
CTAGTAC | 10325 | 0.0 | 11.151926 | 3 |
CTATACT | 15550 | 0.0 | 11.061769 | 4 |
TACCGTG | 7685 | 0.0 | 11.007868 | 7 |
CCGTGAG | 8585 | 0.0 | 10.839425 | 9 |
GTATATA | 44335 | 0.0 | 10.802979 | 1 |
CATACAC | 74810 | 0.0 | 10.616978 | 3 |
GAGCGCG | 1965 | 0.0 | 10.52361 | 7 |
ACACATG | 73880 | 0.0 | 10.458003 | 6 |
GTATTAG | 18000 | 0.0 | 10.429006 | 1 |
GTGTATG | 71395 | 0.0 | 10.405354 | 1 |
GACCGTG | 5250 | 0.0 | 10.384206 | 7 |
GTATAGG | 10575 | 0.0 | 10.366163 | 1 |
TAGACCG | 8125 | 0.0 | 10.353889 | 5 |
ACATGAC | 59330 | 0.0 | 10.305773 | 8 |