Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946382.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24294628 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGCGC | 1705 | 0.0 | 11.851779 | 8 |
AGACCGT | 8635 | 0.0 | 11.48557 | 94 |
TATACCG | 8145 | 0.0 | 10.789263 | 5 |
GCTGTCC | 6315 | 0.0 | 10.641483 | 8 |
GCGTGTA | 6035 | 0.0 | 10.241994 | 92-93 |
TAGGCGG | 5990 | 0.0 | 10.202091 | 4 |
TAGACCG | 6280 | 0.0 | 9.952525 | 5 |
ACATGAC | 67765 | 0.0 | 9.923701 | 8 |
GTATAGA | 14005 | 0.0 | 9.905616 | 1 |
AGGCGTG | 6310 | 0.0 | 9.832877 | 90-91 |
TATACTG | 10770 | 0.0 | 9.730394 | 5 |
CTAGGCT | 7060 | 0.0 | 9.721221 | 4 |
TAGGCTG | 7410 | 0.0 | 9.639769 | 5 |
CATACAC | 80915 | 0.0 | 9.620402 | 3 |
CCGTGAG | 4840 | 0.0 | 9.612364 | 9 |
GTGTATG | 77950 | 0.0 | 9.568187 | 1 |
GTATATA | 35290 | 0.0 | 9.487918 | 1 |
CTAGTAC | 8400 | 0.0 | 9.457348 | 3 |
ACACATG | 78870 | 0.0 | 9.438101 | 6 |
GCCGTGC | 2045 | 0.0 | 9.421716 | 8 |