Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946315.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24862270 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 11540 | 0.0 | 13.601705 | 5 |
CATACAC | 58440 | 0.0 | 13.384426 | 3 |
CTATACT | 12380 | 0.0 | 13.175449 | 4 |
GTCGCGC | 1420 | 0.0 | 12.905913 | 8 |
ACATGAC | 46815 | 0.0 | 12.70753 | 8 |
ACACATG | 58225 | 0.0 | 12.630864 | 6 |
CATGACA | 48640 | 0.0 | 12.134103 | 9 |
GTGTATG | 56420 | 0.0 | 12.029326 | 1 |
TCTATAC | 14680 | 0.0 | 11.943714 | 3 |
CACATGA | 55640 | 0.0 | 11.9251175 | 7 |
TAGACCG | 5445 | 0.0 | 11.737988 | 5 |
TCATACA | 65950 | 0.0 | 11.663294 | 2 |
TATACCG | 7110 | 0.0 | 11.633107 | 5 |
TATACAG | 10695 | 0.0 | 11.556534 | 5 |
ATCATAC | 64460 | 0.0 | 11.27369 | 1 |
GTATATA | 34140 | 0.0 | 11.263353 | 1 |
GTATTAT | 19415 | 0.0 | 11.127163 | 1 |
TACACTG | 7395 | 0.0 | 11.1212225 | 5 |
GTACTAG | 8480 | 0.0 | 11.100519 | 1 |
TAATACT | 19315 | 0.0 | 11.09754 | 4 |