Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946465.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34965026 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 16720 | 0.0 | 13.582461 | 5 |
CTATACT | 17750 | 0.0 | 12.028568 | 4 |
GTATAGA | 24090 | 0.0 | 10.846163 | 1 |
TCTATAC | 22350 | 0.0 | 10.647329 | 3 |
TAATACT | 33260 | 0.0 | 10.420816 | 4 |
GTATTAG | 23985 | 0.0 | 9.951491 | 1 |
ACCGTGC | 4850 | 0.0 | 9.883321 | 8 |
GTATATA | 48600 | 0.0 | 9.851551 | 1 |
CTAGTAC | 11710 | 0.0 | 9.839586 | 3 |
ATACTGT | 21370 | 0.0 | 9.721105 | 6 |
CATACAC | 66820 | 0.0 | 9.536752 | 3 |
CAGTGCG | 2665 | 0.0 | 9.525143 | 9 |
TATACAG | 18550 | 0.0 | 9.479714 | 5 |
TATACCG | 12215 | 0.0 | 9.469111 | 5 |
TAGTACT | 20060 | 0.0 | 9.40091 | 4 |
GTATTAT | 34220 | 0.0 | 9.382625 | 1 |
TAGACTG | 8075 | 0.0 | 9.19988 | 5 |
CTAGACT | 9120 | 0.0 | 9.17871 | 4 |
GTATAAT | 31455 | 0.0 | 9.159708 | 1 |
CCTATAC | 13460 | 0.0 | 9.154274 | 3 |