Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946461.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18700782 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 9830 | 0.0 | 14.342668 | 5 |
CTATACT | 10315 | 0.0 | 13.941657 | 4 |
TATACCG | 6785 | 0.0 | 13.437364 | 5 |
TCTATAC | 12810 | 0.0 | 12.767101 | 3 |
TACCGTG | 4900 | 0.0 | 11.892965 | 7 |
TAGGCCG | 2150 | 0.0 | 11.585096 | 5 |
TAGACTG | 4495 | 0.0 | 11.500724 | 5 |
GTATATA | 26875 | 0.0 | 11.428534 | 1 |
GTATAGG | 7070 | 0.0 | 11.376339 | 1 |
CCGTGCG | 1470 | 0.0 | 11.189796 | 9 |
TATACAG | 9975 | 0.0 | 11.118886 | 5 |
CATACAC | 39020 | 0.0 | 11.080587 | 3 |
GTGTATG | 37635 | 0.0 | 11.035565 | 1 |
TACACTG | 5750 | 0.0 | 11.033877 | 5 |
CTGTGCA | 4050 | 0.0 | 11.024022 | 9 |
GTATTAG | 13770 | 0.0 | 10.964704 | 1 |
CCGTGAG | 4070 | 0.0 | 10.854378 | 9 |
ACATGAC | 33045 | 0.0 | 10.766092 | 8 |
ACCGTGA | 5535 | 0.0 | 10.698452 | 8 |
GTATAGA | 13520 | 0.0 | 10.64561 | 1 |