Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946292.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30552796 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 10155 | 0.0 | 15.735651 | 5 |
TATACTG | 14340 | 0.0 | 14.682992 | 5 |
CTATACT | 15225 | 0.0 | 14.076453 | 4 |
CATACAC | 71340 | 0.0 | 13.801827 | 3 |
TCTATAC | 18530 | 0.0 | 13.645598 | 3 |
TACCGTG | 7715 | 0.0 | 13.584845 | 7 |
GCCGTGC | 2910 | 0.0 | 13.405124 | 8 |
ATACCGT | 8745 | 0.0 | 13.328386 | 6 |
GTATAGA | 18865 | 0.0 | 13.148604 | 1 |
GTATATA | 44665 | 0.0 | 12.898521 | 1 |
ACACATG | 72210 | 0.0 | 12.841491 | 6 |
GTCGCGC | 1365 | 0.0 | 12.739571 | 8 |
ACATGAC | 49530 | 0.0 | 12.601303 | 8 |
GTGTATG | 67780 | 0.0 | 12.520452 | 1 |
TATACAG | 13520 | 0.0 | 12.514443 | 5 |
CTAGGCT | 7750 | 0.0 | 12.492555 | 4 |
TAGTACT | 16590 | 0.0 | 12.210027 | 4 |
CACATGA | 69375 | 0.0 | 12.201029 | 7 |
CATGACA | 51680 | 0.0 | 11.9952135 | 9 |
TCATACA | 81555 | 0.0 | 11.986785 | 2 |