Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946322.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 43034142 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 14010 | 0.0 | 18.120323 | 5 |
TACCGTG | 11315 | 0.0 | 16.118267 | 7 |
ATACCGT | 12995 | 0.0 | 16.024845 | 6 |
CATACAC | 120275 | 0.0 | 15.244341 | 3 |
TCTATAC | 27520 | 0.0 | 15.1357765 | 3 |
TATACTG | 20635 | 0.0 | 15.013823 | 5 |
ACATGAC | 87875 | 0.0 | 14.933842 | 8 |
GTACTAG | 17860 | 0.0 | 14.726252 | 1 |
GTATAGA | 29685 | 0.0 | 14.613549 | 1 |
ACACATG | 116570 | 0.0 | 14.549435 | 6 |
CTATACT | 22435 | 0.0 | 14.542774 | 4 |
CTAGTAC | 14380 | 0.0 | 14.450497 | 3 |
CATGACA | 90195 | 0.0 | 14.340497 | 9 |
CACATGA | 112225 | 0.0 | 14.131772 | 7 |
GTGTATG | 112735 | 0.0 | 14.127383 | 1 |
TGAGCGG | 14520 | 0.0 | 14.097565 | 94 |
TCATACA | 132755 | 0.0 | 13.642886 | 2 |
CTATACC | 21125 | 0.0 | 13.308169 | 4 |
CTGAGCG | 14820 | 0.0 | 13.272402 | 94 |
TAGTACT | 27855 | 0.0 | 13.198284 | 4 |