Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946378.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 33925746 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACCG | 11635 | 0.0 | 16.076778 | 5 |
GTCGCGC | 1615 | 0.0 | 15.423599 | 8 |
CTATACT | 16960 | 0.0 | 15.241202 | 4 |
CATACAC | 102380 | 0.0 | 14.561309 | 3 |
GTATAGA | 23045 | 0.0 | 14.484302 | 1 |
TCTATAC | 20690 | 0.0 | 14.46976 | 3 |
TATACTG | 16465 | 0.0 | 14.357825 | 5 |
ACATGAC | 76050 | 0.0 | 14.306525 | 8 |
CTAGTAC | 12025 | 0.0 | 14.070185 | 3 |
ACACATG | 100855 | 0.0 | 13.99395 | 6 |
CATGACA | 77845 | 0.0 | 13.837775 | 9 |
CACATGA | 97480 | 0.0 | 13.7600765 | 7 |
TACCGTG | 9395 | 0.0 | 13.506703 | 7 |
GTGTATG | 96985 | 0.0 | 13.300686 | 1 |
ATACCGT | 10555 | 0.0 | 13.180014 | 6 |
TCATACA | 110840 | 0.0 | 13.174287 | 2 |
TAGTACT | 21455 | 0.0 | 12.989983 | 4 |
ATCATAC | 111715 | 0.0 | 12.701641 | 1 |
GATTGAG | 89410 | 0.0 | 12.668155 | 7 |
GTATTAT | 27255 | 0.0 | 12.506058 | 1 |