Basic Statistics
Measure | Value |
---|---|
Filename | SRR1946310.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29355312 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGCGC | 1045 | 0.0 | 13.044173 | 8 |
GAGCGCG | 1155 | 0.0 | 12.209207 | 7 |
TATACTG | 14420 | 0.0 | 11.998812 | 5 |
TCTATAC | 17830 | 0.0 | 11.207732 | 3 |
TATACCG | 9025 | 0.0 | 11.096553 | 5 |
CTAGTAC | 9680 | 0.0 | 10.734877 | 3 |
CATACAC | 85330 | 0.0 | 10.618425 | 3 |
CTATACT | 14875 | 0.0 | 10.526368 | 4 |
ACATGAC | 61860 | 0.0 | 10.463064 | 8 |
TATACAG | 13255 | 0.0 | 10.28665 | 5 |
ACACATG | 83940 | 0.0 | 10.252937 | 6 |
TAGTACT | 18275 | 0.0 | 10.188942 | 4 |
TACCGTG | 6605 | 0.0 | 10.034471 | 7 |
CCGTGAG | 7650 | 0.0 | 10.015249 | 9 |
GTACTAG | 12085 | 0.0 | 10.007534 | 1 |
CATGACA | 63865 | 0.0 | 9.980042 | 9 |
TAGACCG | 7925 | 0.0 | 9.967029 | 5 |
GTATAGA | 18740 | 0.0 | 9.944117 | 1 |
CACATGA | 80840 | 0.0 | 9.937199 | 7 |
GCCGTGC | 2550 | 0.0 | 9.769459 | 8 |