All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).

Assembly                     velvet-ctg     
# contigs (>= 0 bp)          17510          
# contigs (>= 1000 bp)       17510          
# contigs (>= 5000 bp)       5897           
# contigs (>= 10000 bp)      2278           
# contigs (>= 25000 bp)      202            
# contigs (>= 50000 bp)      5              
Total length (>= 0 bp)       90225299       
Total length (>= 1000 bp)    90225299       
Total length (>= 5000 bp)    61870406       
Total length (>= 10000 bp)   36489743       
Total length (>= 25000 bp)   6314356        
Total length (>= 50000 bp)   267395         
# contigs                    17510          
Largest contig               58073          
Total length                 90225299       
Reference length             100272607      
GC (%)                       35.87          
Reference GC (%)             35.44          
N50                          8011           
NG50                         7000           
N75                          4081           
NG75                         3020           
L50                          3246           
LG50                         3917           
L75                          7184           
LG75                         9325           
# misassemblies              342            
# misassembled contigs       337            
Misassembled contigs length  2228569        
# local misassemblies        1080           
# unaligned mis. contigs     9              
# unaligned contigs          1297 + 194 part
Unaligned length             4028338        
Genome fraction (%)          85.620         
Duplication ratio            1.004          
# N's per 100 kbp            0.00           
# mismatches per 100 kbp     49.51          
# indels per 100 kbp         23.64          
Largest alignment            58073          
Total aligned length         85981341       
NA50                         7730           
NGA50                        6739           
NA75                         3720           
NGA75                        2577           
LA50                         3303           
LGA50                        4000           
LA75                         7487           
LGA75                        9913